RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

1 row where bioproject = "PRJEB12237" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 1 ✖

bioproject 1

  • PRJEB12237 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32499324 32499324 PRJEB12237_P_NODE_11519_length_155_cov_1.008333_g11323_i0 PRJEB12237 11519 155 1.008333 1.56291615 Edafosvirus sp. 2487765 Viruses Viruses 78.2 3.46e-15   NR AYV78014.1 2487765 g11323 i0 64.7 1.9741935483871 51 18 98.7 0 155 3 189 239 AYV78014.1 MAG: elongation factor 1 alpha long form [Edafosvirus sp.] diamond 306 78.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Edafosvirus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;