RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB12237", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJEB12237 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28296219 28296219 PRJEB12237_P_NODE_10566_length_163_cov_1.250000_g10370_i0 PRJEB12237 10566 163 1.25 2.0375 Streblomastix strix 222440 Preaxostyla other_Eukaryota 49.7 3.09e-5   NR KAA6391469.1 222440 g10370 i0 48.1 1.95092024539877 54 23 99.4 2 163 2 30 78 KAA6391469.1 MAG: hypothetical protein EZS28_013002 [Streblomastix strix] diamond 318 49.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
28864602 28864602 PRJEB12237_P_NODE_11848_length_152_cov_1.709402_g11652_i0 PRJEB12237 11848 152 1.709402 2.59829104 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 51.2 6.78e-6   NR KAJ4458877.1 342808 g11652 i0 50 1.91447368421053 48 24 94.7 0 152 9 119 166 KAJ4458877.1 putative sialate O-acetylesterase [Paratrimastix pyriformis] diamond 291 51.2 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29212148 29212148 PRJEB12237_P_NODE_4569_length_294_cov_2.463320_g4373_i0 PRJEB12237 4569 294 2.46332 7.2421608 Streblomastix strix 222440 Preaxostyla other_Eukaryota 111 1.53e-29   NR KAA6379614.1 222440 g4373 i0 58.2 4.55102040816327 91 38 92.9 0 290 18 3 93 KAA6379614.1 MAG: hypothetical protein EZS28_024857 [Streblomastix strix] diamond 1338 111 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
30475455 30475455 PRJEB12237_P_NODE_4453_length_300_cov_1.860377_g4257_i0 PRJEB12237 4453 300 1.860377 5.581131 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 44.3 0.0217   NR KAK2942807.1 2049346 g4257 i0 34.1 9.1 91 52 83 2 287 39 1363 1453 KAK2942807.1 hypothetical protein BLNAU_22286 [Blattamonas nauphoetae] diamond 2730 44.3 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;