contig_metadata
4 rows where bioproject = "PRJEB11748" and tax_phylum = "Echinodermata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11491936 | 11491936 | PRJEB11748_P_NODE_107230_length_402_cov_17.014663_g105056_i0 | PRJEB11748 | 107230 | 402 | 17.014663 | 68.39894526 | Strongylocentrotus purpuratus | 7668 | Echinodermata | other_Eukaryota | 110 | 2.25e-19 | NTclustered | gi|1752362050|ref|XM_030985729.1| | 7668 | g105056 | i0 | 93.333 | 1.14427860696517 | 75 | 4 | 20 | 1 | 122 | 195 | 1674 | 1600 | PREDICTED: Strongylocentrotus purpuratus clathrin interactor 1 (LOC580579), transcript variant X3, mRNA | blastn | 460 | 110 | 1 | Eukaryota | Opisthokonta | Metazoa | Echinodermata | Echinoidea | Camarodonta | Strongylocentrotidae | Strongylocentrotus | Strongylocentrotus purpuratus | |
| 20109152 | 20109152 | PRJEB11748_P_NODE_109516_length_398_cov_3.192878_g107342_i0 | PRJEB11748 | 109516 | 398 | 3.192878 | 12.70765444 | root | 1 | Root_unresolved | Root_unresolved | 69.4 | 3.78e-7 | NTclustered | gi|2919542517|ref|XM_071621156.1| | 105358 | g107342 | i0 | 91.837 | 19.0326633165829 | 49 | 4 | 12 | 0 | 207 | 255 | 815 | 767 | PREDICTED: Diadema antillarum uncharacterized protein (LOC139709207), mRNA | blastn | 7575 | 69.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Echinodermata | Echinoidea | Diadematoida | Diadematidae | Diadema | Diadema antillarum | |
| 27190807 | 27190807 | PRJEB11748_P_NODE_28822_length_831_cov_1.898701_g27026_i0 | PRJEB11748 | 28822 | 831 | 1.898701 | 15.77820531 | Patiria miniata | 46514 | Echinodermata | other_Eukaryota | 158 | 1.26e-39 | NR | XP_038073899.1 | 46514 | g27026 | i0 | 35.8 | 1.97833935018051 | 274 | 132 | 98.6 | 8 | 830 | 12 | 153 | 383 | XP_038073899.1 uncharacterized protein C05D11.1-like isoform X1 [Patiria miniata] | diamond | 1644 | 158 | 1 | Eukaryota | Opisthokonta | Metazoa | Echinodermata | Asteroidea | Valvatida | Asterinidae | Patiria | Patiria miniata | |
| 28826494 | 28826494 | PRJEB11748_P_NODE_158868_length_324_cov_17.079848_g156686_i0 | PRJEB11748 | 158868 | 324 | 17.079848 | 55.33870752 | Echinoidea | 7625 | Echinodermata | other_Eukaryota | 67 | 2.25e-10 | NR | XP_041457677.1 | 7654 | g156686 | i0 | 67.3 | 0.962962962962963 | 52 | 17 | 48.1 | 0 | 29 | 184 | 290 | 341 | XP_041457677.1 pre-mRNA-splicing factor ISY1 homolog isoform X1 [Lytechinus variegatus] | diamond | 312 | 67 | 1 | Eukaryota | Opisthokonta | Metazoa | Echinodermata | Echinoidea | Temnopleuroida | Toxopneustidae | Lytechinus | Lytechinus variegatus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;