RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB11748" and tax_phylum = "Candidatus Walliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Walliibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20418232 20418232 PRJEB11748_P_NODE_291537_length_223_cov_17.981481_g289354_i0 PRJEB11748 291537 223 17.981481 40.09870263 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 90.1 6.08e-19   NR HOT76098.1 2053640 g289354 i0 74.2 0.887892376681614 66 13 88.8 1 199 2 783 844 HOT76098.1 YbhB/YbcL family Raf kinase inhibitor-like protein [Candidatus Wallbacteria bacterium] diamond 198 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
28549060 28549060 PRJEB11748_P_NODE_325547_length_208_cov_2.156463_g323364_i0 PRJEB11748 325547 208 2.156463 4.48544304 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 120 1.58e-31   NR HOD40618.1 2053640 g323364 i0 93.9 0.951923076923077 66 4 95.2 0 3 200 121 186 HOD40618.1 FliA/WhiG family RNA polymerase sigma factor [Candidatus Wallbacteria bacterium] diamond 198 120 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;