RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB11748" and tax_phylum = "Candidatus Uhriibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Uhriibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30412346 30412346 PRJEB11748_P_NODE_277733_length_231_cov_1.282353_g275550_i0 PRJEB11748 277733 231 1.282353 2.96223543 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 89.7 6.81e-20   NR MDP3793195.1 2053634 g275550 i0 54.5 1.93506493506494 77 34 98.7 1 3 230 137 213 MDP3793195.1 coenzyme F420-0:L-glutamate ligase [Candidatus Uhrbacteria bacterium] diamond 447 89.7 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium
31707847 31707847 PRJEB11748_P_NODE_121317_length_376_cov_20.168254_g119141_i0 PRJEB11748 121317 376 20.168254 75.83263504 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 125 1.19e-30   NR HCC83273.1 2053634 g119141 i0 73.8 1.27659574468085 80 21 63.8 0 259 20 176 255 HCC83273.1 elongation factor 4 [Candidatus Uhrbacteria bacterium] diamond 480 125 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium
31771323 31771323 PRJEB11748_P_NODE_94237_length_431_cov_2.721622_g92069_i0 PRJEB11748 94237 431 2.721622 11.73019082 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 94.4 5.97e-20   NR MCE9586679.1 2053634 g92069 i0 66.2 1.08584686774942 77 25 53.6 1 343 113 228 303 MCE9586679.1 hypothetical protein [Candidatus Uhrbacteria bacterium] diamond 468 94.4 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium
32845542 32845542 PRJEB11748_P_NODE_191080_length_291_cov_10.891304_g188897_i0 PRJEB11748 191080 291 10.891304 31.69369464 Candidatus Uhrbacteria bacterium CG_4_1 2053634 Bacteria Bacteria 61.2 1.86e-8   NR PIZ52777.1 1975028 g188897 i0 53.4 1.23711340206186 58 27 59.8 0 197 24 1 58 PIZ52777.1 MAG: hypothetical protein COY25_04545 [Candidatus Uhrbacteria bacterium CG_4_10_14_0_2_um_filter_41_7] diamond 360 61.2 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium CG_4_10_14_0_2_um_filter_41_7

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;