RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB11748", tax_phylum = "Candidatus Terryibacteriota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 1 ✖

tax_phylum 1

  • Candidatus Terryibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28068932 28068932 PRJEB11748_P_NODE_266105_length_237_cov_4.585227_g263922_i0 PRJEB11748 266105 237 4.585227 10.86698799 Bacillati 1783272 Bacteria Bacteria 57.4 2.34e-7   NR PJE73737.1 1975026 g263922 i0 52.3 4.22784810126582 65 29 82.3 1 226 32 466 528 PJE73737.1 MAG: hypothetical protein COV02_00925, partial [Candidatus Terrybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_41_10] diamond 1002 57.8 0.993079584775087 Bacteria Bacteria candidate phyla   Candidatus Terryibacteriota         Candidatus Terrybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_41_10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;