RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJEB11748" and tax_phylum = "Candidatus Roizmaniibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Roizmaniibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11492637 11492637 PRJEB11748_P_NODE_138610_length_350_cov_4.840830_g136432_i0 PRJEB11748 138610 350 4.84083 16.942905 Bacteria 2 Bacteria Bacteria 97.1 1.1e-20   NR KKR94289.1 1618474 g136432 i0 67.9 6.73714285714286 56 18 48 0 281 114 1 56 KKR94289.1 MAG: primase protein [Candidatus Roizmanbacteria bacterium GW2011_GWA1_41_13] diamond 2358 97.1 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium GW2011_GWA1_41_13
27601858 27601858 PRJEB11748_P_NODE_57744_length_560_cov_5.458918_g55616_i0 PRJEB11748 57744 560 5.458918 30.5699408 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 181 2.19e-52   NR NTU46449.1 2282149 g55616 i0 62.7 0.760714285714286 142 53 76.1 0 23 448 200 341 NTU46449.1 Fic family protein [Candidatus Roizmanbacteria bacterium] diamond 426 181 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
31012318 31012318 PRJEB11748_P_NODE_245295_length_250_cov_1.497354_g243112_i0 PRJEB11748 245295 250 1.497354 3.743385 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 75.9 8.59e-14   NR QQS44320.1 2282149 g243112 i0 51.8 1.02 85 37 98.4 2 3 248 255 338 QQS44320.1 MAG: glycosyltransferase family 39 protein [Candidatus Roizmanbacteria bacterium] diamond 255 75.9 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
31676096 31676096 PRJEB11748_P_NODE_100497_length_416_cov_21.211268_g98327_i0 PRJEB11748 100497 416 21.211268 88.23887488 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 165 1.58e-45   NR MBI4973814.1 2282149 g98327 i0 62.7 0.908653846153846 126 45 90.9 1 39 416 380 503 MBI4973814.1 O-antigen ligase family protein [Candidatus Roizmanbacteria bacterium] diamond 378 165 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;