RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJEB11748" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 7 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26779799 26779799 PRJEB11748_P_NODE_332421_length_205_cov_5.111111_g330238_i0 PRJEB11748 332421 205 5.111111 10.47777755 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 42 0.0429   NR MBI5154760.1 2026781 g330238 i0 35 0.878048780487805 60 39 87.8 0 20 199 421 480 MBI5154760.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [Candidatus Poribacteria bacterium] diamond 180 42 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
27437737 27437737 PRJEB11748_P_NODE_193923_length_289_cov_2.105263_g191740_i0 PRJEB11748 193923 289 2.105263 6.08421007 Bacteria 2 Bacteria Bacteria 113 4.31e-30   NR MFQ6040851.1 2026781 g191740 i0 54.4 7.32871972318339 90 41 93.4 0 19 288 1 90 MFQ6040851.1 XisI protein [Candidatus Poribacteria bacterium] diamond 2118 113 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30058087 30058087 PRJEB11748_P_NODE_226331_length_263_cov_1.613861_g224148_i0 PRJEB11748 226331 263 1.613861 4.24445443 Pseudomonadati 3379134 Bacteria Bacteria 103 3.2099999999999994e-24   NR MYA69641.1 2026781 g224148 i0 58.1 3.92395437262357 86 36 98.1 0 2 259 201 286 MYA69641.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 1032 103 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30089722 30089722 PRJEB11748_P_NODE_113672_length_390_cov_3.413374_g111498_i0 PRJEB11748 113672 390 3.413374 13.3121586 Bacteria 2 Bacteria Bacteria 117 1.14e-27   NR MDE0553347.1 2026781 g111498 i0 49.6 1.87692307692308 121 56 93.1 1 21 383 237 352 MDE0553347.1 DUF1998 domain-containing protein [Candidatus Poribacteria bacterium] diamond 732 118 0.991525423728814 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31290462 31290462 PRJEB11748_P_NODE_218175_length_269_cov_1.802885_g215992_i0 PRJEB11748 218175 269 1.802885 4.84976065 Bacteria 2 Bacteria Bacteria 43.5 0.0275   NR HIE28682.1 2026781 g215992 i0 48.6 2.98884758364312 37 19 41.3 0 205 95 543 579 HIE28682.1 tetratricopeptide repeat protein [Candidatus Poribacteria bacterium] diamond 804 43.9 0.990888382687927 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31296775 31296775 PRJEB11748_P_NODE_307695_length_216_cov_1.522581_g305512_i0 PRJEB11748 307695 216 1.522581 3.28877496 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 49.7 9.57e-5   NR RKU36465.1 2026781 g305512 i0 42.9 0.777777777777778 56 32 77.8 0 168 1 371 426 RKU36465.1 MAG: hypothetical protein C6496_13530 [Candidatus Poribacteria bacterium] diamond 168 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32530870 32530870 PRJEB11748_P_NODE_369079_length_188_cov_2.929134_g366896_i0 PRJEB11748 369079 188 2.929134 5.50677192 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 80.1 1.2e-15   NR MBM3239487.1 2026781 g366896 i0 52.5 3.79787234042553 61 29 97.3 0 5 187 424 484 MBM3239487.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 714 80.1 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;