contig_metadata
10 rows where bioproject = "PRJEB11748" and tax_phylum = "Candidatus Parcubacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16287191 | 16287191 | PRJEB11748_P_NODE_347013_length_199_cov_9.898551_g344830_i0 | PRJEB11748 | 347013 | 199 | 9.898551 | 19.69811649 | Parcubacteria bacterium C7867- | 2762014 | Bacteria | Bacteria | 67.4 | 3.67e-11 | NR | KND48017.1 | 1659200 | g344830 | i0 | 87.2 | 0.587939698492462 | 39 | 5 | 58.8 | 0 | 174 | 58 | 98 | 136 | KND48017.1 MAG: trigger factor [Parcubacteria bacterium C7867-006] | diamond | 117 | 67.4 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Parcubacteria bacterium C7867-006 | ||||||
| 26747516 | 26747516 | PRJEB11748_P_NODE_174221_length_307_cov_35.065041_g172038_i0 | PRJEB11748 | 174221 | 307 | 35.065041 | 107.64967587 | Candidatus Parcubacteria bacterium | 2762014 | Bacteria | Bacteria | 122 | 2.1999999999999994e-32 | NR | MDO8659288.1 | 2762014 | g172038 | i0 | 84 | 0.732899022801303 | 75 | 11 | 72.3 | 1 | 61 | 282 | 56 | 130 | MDO8659288.1 hypothetical protein [Candidatus Parcubacteria bacterium] | diamond | 225 | 122 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Candidatus Parcubacteria bacterium | ||||||
| 27190700 | 27190700 | PRJEB11748_P_NODE_150202_length_335_cov_2.470803_g148021_i0 | PRJEB11748 | 150202 | 335 | 2.470803 | 8.27719005 | Parcubacteria bacterium C7867- | 2762014 | Bacteria | Bacteria | 176 | 1.79e-50 | NR | KND51268.1 | 1659195 | g148021 | i0 | 85.4 | 2.82985074626866 | 103 | 15 | 92.2 | 0 | 331 | 23 | 175 | 277 | KND51268.1 MAG: ribonuclease Y [Parcubacteria bacterium C7867-001] | diamond | 948 | 176 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Parcubacteria bacterium C7867-001 | ||||||
| 27601804 | 27601804 | PRJEB11748_P_NODE_312824_length_213_cov_10.381579_g310641_i0 | PRJEB11748 | 312824 | 213 | 10.381579 | 22.11276327 | Candidatus Parcubacteria bacterium | 2762014 | Bacteria | Bacteria | 63.9 | 2.82e-11 | NR | MEN9561312.1 | 2762014 | g310641 | i0 | 64.6 | 0.676056338028169 | 48 | 17 | 67.6 | 0 | 179 | 36 | 1 | 48 | MEN9561312.1 GtrA-like protein [Candidatus Parcubacteria bacterium] | diamond | 144 | 63.9 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Candidatus Parcubacteria bacterium | ||||||
| 27696712 | 27696712 | PRJEB11748_P_NODE_370504_length_187_cov_5.619048_g368321_i0 | PRJEB11748 | 370504 | 187 | 5.619048 | 10.50761976 | Candidatus Parcubacteria bacterium | 2762014 | Bacteria | Bacteria | 59.7 | 1.76e-8 | NR | GIW69054.1 | 2762014 | g368321 | i0 | 85.7 | 0.898395721925134 | 28 | 4 | 44.9 | 0 | 23 | 106 | 321 | 348 | GIW69054.1 MAG: putative adenine-specific methylase [Candidatus Parcubacteria bacterium] | diamond | 168 | 59.7 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Candidatus Parcubacteria bacterium | ||||||
| 29054050 | 29054050 | PRJEB11748_P_NODE_179848_length_302_cov_3.161826_g177665_i0 | PRJEB11748 | 179848 | 302 | 3.161826 | 9.54871452 | Candidatus Parcubacteria bacterium | 2762014 | Bacteria | Bacteria | 103 | 1.61e-23 | NR | RJQ29228.1 | 2762014 | g177665 | i0 | 57.6 | 1.69867549668874 | 85 | 34 | 84.4 | 1 | 6 | 260 | 251 | 333 | RJQ29228.1 MAG: phage major capsid protein [Candidatus Parcubacteria bacterium] | diamond | 513 | 103 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Candidatus Parcubacteria bacterium | ||||||
| 29085656 | 29085656 | PRJEB11748_P_NODE_201088_length_283_cov_1.319820_g198905_i0 | PRJEB11748 | 201088 | 283 | 1.31982 | 3.7350906 | Candidatus Parcubacteria bacterium | 2762014 | Bacteria | Bacteria | 55.5 | 1.67e-6 | NR | NCQ56158.1 | 2762014 | g198905 | i0 | 45.7 | 0.742049469964664 | 70 | 37 | 73.1 | 1 | 70 | 276 | 202 | 271 | NCQ56158.1 hypothetical protein [Candidatus Parcubacteria bacterium] | diamond | 210 | 55.5 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Candidatus Parcubacteria bacterium | ||||||
| 29085731 | 29085731 | PRJEB11748_P_NODE_289228_length_225_cov_1.426829_g287045_i0 | PRJEB11748 | 289228 | 225 | 1.426829 | 3.21036525 | Candidatus Parcubacteria bacterium | 2762014 | Bacteria | Bacteria | 98.2 | 2.16e-22 | NR | RMD61734.1 | 2762014 | g287045 | i0 | 100 | 0.6 | 45 | 0 | 60 | 0 | 223 | 89 | 301 | 345 | RMD61734.1 MAG: N4-gp56 family major capsid protein [Candidatus Parcubacteria bacterium] | diamond | 135 | 98.2 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Candidatus Parcubacteria bacterium | ||||||
| 29211985 | 29211985 | PRJEB11748_P_NODE_213689_length_272_cov_5.734597_g211506_i0 | PRJEB11748 | 213689 | 272 | 5.734597 | 15.59810384 | Candidatus Parcubacteria bacterium | 2762014 | Bacteria | Bacteria | 84.3 | 1.17e-16 | NR | RME60446.1 | 2762014 | g211506 | i0 | 50.7 | 3.45220588235294 | 75 | 37 | 82.7 | 0 | 247 | 23 | 1 | 75 | RME60446.1 MAG: ATP-dependent helicase [Candidatus Parcubacteria bacterium] | diamond | 939 | 84.3 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Candidatus Parcubacteria bacterium | ||||||
| 30633005 | 30633005 | PRJEB11748_P_NODE_281933_length_228_cov_9.353293_g279750_i0 | PRJEB11748 | 281933 | 228 | 9.353293 | 21.32550804 | Candidatus Parcubacteria bacterium | 2762014 | Bacteria | Bacteria | 133 | 4.27e-36 | NR | GIW68042.1 | 2762014 | g279750 | i0 | 94.1 | 0.894736842105263 | 68 | 4 | 89.5 | 0 | 206 | 3 | 232 | 299 | GIW68042.1 MAG: hypothetical protein KatS3mg096_910 [Candidatus Parcubacteria bacterium] | diamond | 204 | 133 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Candidatus Parcubacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;