RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJEB11748" and tax_phylum = "Candidatus Doudnaibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Doudnaibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29212109 29212109 PRJEB11748_P_NODE_386269_length_175_cov_4.070175_g384086_i0 PRJEB11748 386269 175 4.070175 7.12280625 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 91.7 5.1900000000000005e-21   NR HMQ01862.1 2052150 g384086 i0 80.4 1.92 56 11 96 0 6 173 87 142 HMQ01862.1 hypothetical protein [Candidatus Doudnabacteria bacterium] diamond 336 91.7 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
32877045 32877045 PRJEB11748_P_NODE_250460_length_246_cov_10.264865_g248277_i0 PRJEB11748 250460 246 10.264865 25.2515679 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 97.4 1.63e-21   NR MBI5530612.1 2052150 g248277 i0 54.5 0.939024390243902 77 35 93.9 0 7 237 177 253 MBI5530612.1 glycosyltransferase family 39 protein [Candidatus Doudnabacteria bacterium] diamond 231 97.4 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;