RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB11748" and tax_phylum = "Candidatus Delongiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Delongiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22660901 22660901 PRJEB11748_P_NODE_259618_length_241_cov_2.272222_g257435_i0 PRJEB11748 259618 241 2.272222 5.47605502 Bacillati 1783272 Bacteria Bacteria 100 1.69e-22   NR OGE83604.1 1817817 g257435 i0 66.7 8.10373443983402 72 24 89.6 0 24 239 584 655 OGE83604.1 MAG: hypothetical protein A2Y39_00295 [Candidatus Delongbacteria bacterium GWF2_40_14] diamond 1953 101 0.99009900990099 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium GWF2_40_14

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;