RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB11748" and tax_phylum = "Candidatus Curtissiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Curtissiibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26589406 26589406 PRJEB11748_P_NODE_310501_length_214_cov_12.111111_g308318_i0 PRJEB11748 310501 214 12.111111 25.91777754 Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_ 2750075 Bacteria Bacteria 51.2 2.59e-5   NR OGD87239.1 1797710 g308318 i0 45.2 2.41121495327103 42 23 58.9 0 187 62 254 295 OGD87239.1 MAG: D-tyrosyl-tRNA deacylase [Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_40_12] diamond 516 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_40_12
27759675 27759675 PRJEB11748_P_NODE_130144_length_362_cov_13.956811_g127967_i0 PRJEB11748 130144 362 13.956811 50.52365582 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 104 2.5599999999999998e-23   NR MDP2633005.1 2750075 g127967 i0 72.6 0.513812154696133 62 17 51.4 0 159 344 67 128 MDP2633005.1 glycosyltransferase family 39 protein [Candidatus Curtissbacteria bacterium] diamond 186 104 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
27822702 27822702 PRJEB11748_P_NODE_172204_length_310_cov_1.730924_g170021_i0 PRJEB11748 172204 310 1.730924 5.3658644 Candidatus Curtissbacteria bacterium GW2 2750075 Bacteria Bacteria 81.6 5.95e-17   NR KKQ89288.1 1618414 g170021 i0 66.7 2.94193548387097 60 20 58.1 0 115 294 23 82 KKQ89288.1 MAG: hypothetical protein UT12_C0017G0009 [Candidatus Curtissbacteria bacterium GW2011_GWC2_38_9] diamond 912 81.6 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium GW2011_GWC2_38_9
31518264 31518264 PRJEB11748_P_NODE_182796_length_299_cov_4.315126_g180613_i0 PRJEB11748 182796 299 4.315126 12.90222674 Candidatus Curtissbacteria bacterium GW2 2750075 Bacteria Bacteria 55.5 2.47e-6   NR KKR65046.1 1618407 g180613 i0 78.1 0.321070234113712 32 7 32.1 0 192 287 558 589 KKR65046.1 MAG: Cell wall/surface repeat protein [Candidatus Curtissbacteria bacterium GW2011_GWA1_40_47] diamond 96 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium GW2011_GWA1_40_47

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;