RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB11748", tax_kingdom = "Shotokuvirae" and tax_phylum = "Cressdnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 3 ✖

tax_kingdom 1

  • Shotokuvirae · 3 ✖

bioproject 1

  • PRJEB11748 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3533861 3533861 PRJEB11748_P_NODE_172203_length_310_cov_1.734940_g170020_i0 PRJEB11748 172203 310 1.73494 5.378314 Genomoviridae 1910928 Viruses Viruses 466 8.73e-127   NTclustered gi|746815432|ref|NC_026144.1| 1519399 g170020 i0 97.778 6.18709677419355 270 6 87 0 24 293 243 512 Sewage-associated gemycircularvirus-4 isolate BS3913, complete sequence blastn 1918 466 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemykrogvirus Gemykrogvirus sewopo1
16593711 16593711 PRJEB11748_P_NODE_25214_length_899_cov_6.554893_g23539_i0 PRJEB11748 25214 899 6.554893 58.92848807 Galvornvirus isengard 2955925 Viruses Viruses 1299 0   NTclustered gi|2906152047|gb|PQ646631.1| 1954248 g23539 i0 95.36 1.81868743047831 819 34 91 3 1 817 2065 2881 MAG: Circoviridae sp. isolate k127_526389 genomic sequence blastn 1635 1299 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Rohanvirales Nenyaviridae Galvornvirus Galvornvirus isengard
18835588 18835588 PRJEB11748_P_NODE_244375_length_250_cov_7.925926_g242192_i0 PRJEB11748 244375 250 7.925926 19.814815 Genomoviridae 1910928 Viruses Viruses 398 2.5199999999999997e-106   NTclustered gi|746815432|ref|NC_026144.1| 1519399 g242192 i0 98.667 6.324 225 2 90 1 19 242 778 554 Sewage-associated gemycircularvirus-4 isolate BS3913, complete sequence blastn 1581 398 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemykrogvirus Gemykrogvirus sewopo1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;