RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

22 rows where bioproject = "PRJEB11748", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 22 ✖

tax_kingdom 1

  • Metazoa · 22 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1289995 1289995 PRJEB11748_P_NODE_191962_length_290_cov_37.187773_g189779_i0 PRJEB11748 191962 290 37.187773 107.8445417 Acropora millepora 45264 Cnidaria other_Eukaryota 143 1.55e-29   NTclustered gi|2113891346|ref|XM_029335370.2| 45264 g189779 i0 83.66 46.6310344827586 153 23 52 2 117 268 497 346 PREDICTED: Acropora millepora ubiquitin-40S ribosomal protein S27a (LOC114957821), mRNA blastn 13523 143 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
3844199 3844199 PRJEB11748_P_NODE_314744_length_212_cov_17.410596_g312561_i0 PRJEB11748 314744 212 17.410596 36.91046352 Galaxea astreata 154325 Cnidaria other_Eukaryota 56.5 0.001   NTclustered gi|640940784|gb|KJ591050.1| 154325 g312561 i0 94.444 0.169811320754717 36 2 17 0 4 39 1 36 Galaxea astreata ferritin mRNA, complete cds blastn 36 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Euphylliidae Galaxea Galaxea astreata
6393739 6393739 PRJEB11748_P_NODE_186046_length_296_cov_3.570213_g183863_i0 PRJEB11748 186046 296 3.570213 10.56783048 Eunicella cavolini 317547 Cnidaria other_Eukaryota 60.2 1.64e-4   NTclustered gi|2918369552|emb|OZ237724.1| 317547 g183863 i0 97.222 0.638513513513513 36 0 12 1 77 111 4869875 4869840 Eunicella cavolini genome assembly, chromosome: 8 blastn 189 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
6394372 6394372 PRJEB11748_P_NODE_219206_length_268_cov_2.637681_g217023_i0 PRJEB11748 219206 268 2.637681 7.06898508 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.007   NTclustered gi|2917940745|emb|OZ237569.1| 6108 g217023 i0 96.875 0.119402985074627 32 1 12 0 31 62 8021993 8022024 Anemonia sulcata genome assembly, chromosome: 15 blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
7361836 7361836 PRJEB11748_P_NODE_294146_length_222_cov_4.596273_g291963_i0 PRJEB11748 294146 222 4.596273 10.20372606 Coronatae 86058 Cnidaria other_Eukaryota 73.1 1.51e-8   NTclustered gi|15208481|gb|AY026368.1| 86043 g291963 i0 86.567 0.603603603603604 67 8 30 1 23 88 1403 1469 Atolla vanhoeffeni 28S large subunit ribosomal RNA gene, partial sequence blastn 134 73.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Coronatae Atollidae Atolla Atolla vanhoeffeni
9913212 9913212 PRJEB11748_P_NODE_54508_length_578_cov_17.529981_g52392_i0 PRJEB11748 54508 578 17.529981 101.32329018 Opisthokonta 33154 Cnidaria other_Eukaryota 196 2.49e-45   NTclustered gi|15208481|gb|AY026368.1| 86043 g52392 i0 78.55 56.9134948096886 331 47 63 24 58 377 1804 2121 Atolla vanhoeffeni 28S large subunit ribosomal RNA gene, partial sequence blastn 32896 196 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Coronatae Atollidae Atolla Atolla vanhoeffeni
10220108 10220108 PRJEB11748_P_NODE_274309_length_232_cov_14.725146_g272126_i0 PRJEB11748 274309 232 14.725146 34.16233872 Hydra vulgaris 6087 Cnidaria other_Eukaryota 54.7 0.006   NTclustered gi|2744802182|ref|XM_047268008.2| 6087 g272126 i0 96.875 0.275862068965517 32 1 14 0 53 84 1154 1185 PREDICTED: Hydra vulgaris torsin-1A (LOC100197977), transcript variant X1, mRNA blastn 64 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
14046036 14046036 PRJEB11748_P_NODE_311732_length_214_cov_2.104575_g309549_i0 PRJEB11748 311732 214 2.104575 4.5037905 Anemonia sulcata 6108 Cnidaria other_Eukaryota 65.8 2.42e-6   NTclustered gi|2917940696|emb|OZ237557.1| 6108 g309549 i0 95.238 19.5747663551402 42 1 20 1 1 42 15020049 15020009 Anemonia sulcata genome assembly, chromosome: 3 blastn 4189 65.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
16286016 16286016 PRJEB11748_P_NODE_190993_length_291_cov_16.308696_g188810_i0 PRJEB11748 190993 291 16.308696 47.45830536 Metazoa 33208 Cnidaria other_Eukaryota 58.4 5.79e-4   NTclustered gi|448871684|gb|KC150884.1| 50429 g188810 i0 100 1.28178694158076 31 0 11 0 229 259 2257 2287 Stylophora pistillata hemicentin-like protein (g11674) gene, partial cds blastn 373 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
16594768 16594768 PRJEB11748_P_NODE_309234_length_215_cov_2.811688_g307051_i0 PRJEB11748 309234 215 2.811688 6.0451292 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 112 1.2599999999999998e-29   NR XP_057290043.1 13093 g307051 i0 75.4 2.72093023255814 65 16 90.7 0 5 199 49 113 XP_057290043.1 60S ribosomal protein L27a-like [Hydractinia symbiolongicarpus] diamond 585 112 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
20109269 20109269 PRJEB11748_P_NODE_120856_length_377_cov_9.066456_g118680_i0 PRJEB11748 120856 377 9.066456 34.18053912 Ptilella 2610848 Cnidaria other_Eukaryota 196 1.57e-45   NTclustered gi|2160785908|gb|OL741702.1| 2610849 g118680 i0 86.486 49.7957559681698 185 17 49 6 169 351 181 3 Ptilella grandis voucher NMS.Z.2019.25.9 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18773 196 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleralcyonacea Pennatulidae Ptilella Ptilella grandis
27469247 27469247 PRJEB11748_P_NODE_56483_length_567_cov_5.179842_g54358_i0 PRJEB11748 56483 567 5.179842 29.36970414 Metazoa 33208 Cnidaria other_Eukaryota 89.7 2.12e-18   NR XP_001638931.2 45351 g54358 i0 45.8 8.79365079365079 96 48 48.7 2 348 73 78 173 XP_001638931.2 nuclear transcription factor Y subunit beta isoform X2 [Nematostella vectensis] diamond 4986 90.5 0.991160220994475 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
27728368 27728368 PRJEB11748_P_NODE_95064_length_429_cov_2.896739_g92896_i0 PRJEB11748 95064 429 2.896739 12.42701031 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 58.2 1.17e-6   NR XP_066920451.1 252671 g92896 i0 43.9 0.573426573426573 82 32 55.2 3 175 411 694 764 XP_066920451.1 origin recognition complex subunit 3-like [Clytia hemisphaerica] diamond 246 58.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
27791241 27791241 PRJEB11748_P_NODE_78924_length_473_cov_6.094660_g76764_i0 PRJEB11748 78924 473 6.09466 28.8277418 Porites lobata 104759 Cnidaria other_Eukaryota 73.2 2.59e-13   NR CAH3038652.1 104759 g76764 i0 79.5 2.43551797040169 44 9 27.9 0 18 149 81 124 CAH3038652.1 unnamed protein product [Porites lobata] diamond 1152 73.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites lobata
29621845 29621845 PRJEB11748_P_NODE_246810_length_249_cov_1.617021_g244627_i0 PRJEB11748 246810 249 1.617021 4.02638229 Orbicella faveolata 48498 Cnidaria other_Eukaryota 44.7 0.00826   NR XP_020625288.1 48498 g244627 i0 40.7 0.710843373493976 59 32 68.7 2 249 79 189 246 XP_020625288.1 coadhesin-like [Orbicella faveolata] diamond 177 44.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
29811669 29811669 PRJEB11748_P_NODE_320851_length_210_cov_2.000000_g318668_i0 PRJEB11748 320851 210 2 4.2 Porites evermanni 104178 Cnidaria other_Eukaryota 55.5 8.18e-7   NR CAH3189486.1 104178 g318668 i0 46.9 0.914285714285714 64 34 91.4 0 19 210 950 1013 CAH3189486.1 unnamed protein product [Porites evermanni] diamond 192 55.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites evermanni
29969605 29969605 PRJEB11748_P_NODE_200311_length_283_cov_7.157658_g198128_i0 PRJEB11748 200311 283 7.157658 20.25617214 Xenia sp. Carnegie-2 86540 Cnidaria other_Eukaryota 69.3 2.58e-11   NR XP_046843595.1 2897299 g198128 i0 44.8 1.87632508833922 87 37 92.2 3 18 278 477 552 XP_046843595.1 anoctamin-10-like [Xenia sp. Carnegie-2017] diamond 531 69.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
30343162 30343162 PRJEB11748_P_NODE_285712_length_226_cov_11.721212_g283529_i0 PRJEB11748 285712 226 11.721212 26.48993912 Pocillopora 46730 Cnidaria other_Eukaryota 55.1 1.39e-6   NR XP_027055156.1 46731 g283529 i0 76.7 1.64601769911504 30 7 39.8 0 195 106 1038 1067 XP_027055156.1 LOW QUALITY PROTEIN: sporulation-specific protein 15-like [Pocillopora damicornis] diamond 372 55.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
30475305 30475305 PRJEB11748_P_NODE_214233_length_272_cov_2.132701_g212050_i0 PRJEB11748 214233 272 2.132701 5.80094672 Montipora foliosa 591990 Cnidaria other_Eukaryota 44.3 0.0139   NR XP_068686699.1 591990 g212050 i0 34.8 2.28308823529412 69 31 64 3 23 196 83 148 XP_068686699.1 bone morphogenetic protein 1-like [Montipora foliosa] diamond 621 44.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora foliosa
31486858 31486858 PRJEB11748_P_NODE_372856_length_185_cov_6.548387_g370673_i0 PRJEB11748 372856 185 6.548387 12.11451595 Acropora millepora 45264 Cnidaria other_Eukaryota 55.8 1.08e-7   NR XP_044162838.1 45264 g370673 i0 47.6 2.74054054054054 42 22 68.1 0 171 46 113 154 XP_044162838.1 DPH4 homolog isoform X1 [Acropora millepora] diamond 507 55.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
31897689 31897689 PRJEB11748_P_NODE_178277_length_303_cov_14.971074_g176094_i0 PRJEB11748 178277 303 14.971074 45.36235422 Pocillopora damicornis 46731 Cnidaria other_Eukaryota 129 3.72e-35   NR RMX48186.1 46731 g176094 i0 79 2.35643564356436 81 17 80.2 0 267 25 115 195 RMX48186.1 hypothetical protein pdam_00015396 [Pocillopora damicornis] diamond 714 129 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
32687970 32687970 PRJEB11748_P_NODE_147620_length_338_cov_3.844765_g145439_i0 PRJEB11748 147620 338 3.844765 12.9953057 Henneguya salminicola 69463 Cnidaria other_Eukaryota 103 2.18e-24   NR KAF0986447.1 69463 g145439 i0 63.8 1.43786982248521 80 28 71 1 12 251 178 256 KAF0986447.1 hypothetical protein HZS_1981 [Henneguya salminicola] diamond 486 103 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Henneguya Henneguya salminicola

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;