RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB11748", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7670961 7670961 PRJEB11748_P_NODE_36067_length_730_cov_1706.786248_g34119_i0 PRJEB11748 36067 730 1706.786248 12459.5396104 Cryptomycota sp. 2012228 Fungi Fungi 946 0   NTclustered gi|2468790980|gb|OQ702912.1| 2012228 g34119 i0 92.504 83.0808219178082 667 40 91 7 68 730 4339 3679 Cryptomycota sp. isolate PSC211 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 60649 946 1 Eukaryota Opisthokonta Fungi Cryptomycota         Cryptomycota sp.
28454214 28454214 PRJEB11748_P_NODE_196706_length_286_cov_9.191111_g194523_i0 PRJEB11748 196706 286 9.191111 26.28657746 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 61.6 2.18e-9   NR PJF16769.1 1246581 g194523 i0 50.8 0.63986013986014 61 29 62.9 1 40 219 94 154 PJF16769.1 hypothetical protein PSACC_03505 [Paramicrosporidium saccamoebae] diamond 183 61.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;