RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

31 rows where bioproject = "PRJEB11748", tax_kingdom = "Fungi" and tax_phylum = "Chytridiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 31 ✖

tax_kingdom 1

  • Fungi · 31 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2258468 2258468 PRJEB11748_P_NODE_172502_length_309_cov_10.157258_g170319_i0 PRJEB11748 172502 309 10.157258 31.38592722 Eukaryota 2759 Fungi Fungi 516 8.51e-142   NTclustered gi|2165384402|gb|OL869113.1| 2020344 g170319 i0 96.774 100.802588996764 310 8 100 2 1 309 66 374 Uncultured Lobulomycetales isolate Fragilaria-MDA25 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 31148 521 0.990403071017274 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales     uncultured Lobulomycetales
6087089 6087089 PRJEB11748_P_NODE_265065_length_238_cov_1.745763_g262882_i0 PRJEB11748 265065 238 1.745763 4.15491594 Rhizophydium 60186 Fungi Fungi 156 1.58e-33   NTclustered gi|82398246|gb|DQ273781.1| 109902 g262882 i0 80.717 53.1512605042017 223 23 89 14 1 213 1785 1997 Rhizophydium sphaerotheca isolate AFTOL-ID 37 28S ribosomal RNA gene, partial sequence blastn 12650 156 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Rhizophydiaceae Rhizophydium Rhizophydium sphaerotheca
6394499 6394499 PRJEB11748_P_NODE_225486_length_263_cov_7.420792_g223303_i0 PRJEB11748 225486 263 7.420792 19.51668296 Spizellomyces punctatus 109760 Fungi Fungi 206 1.74e-48   NTclustered gi|1027005164|ref|XM_016754649.1| 645134 g223303 i0 88.824 34.787072243346 170 15 64 4 23 190 293 460 Spizellomyces punctatus DAOM BR117 60S ribosomal protein L44 (SPPG_06444), mRNA blastn 9149 206 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
7361322 7361322 PRJEB11748_P_NODE_220086_length_267_cov_6.737864_g217903_i0 PRJEB11748 220086 267 6.737864 17.99009688 Spizellomyces 4815 Fungi Fungi 91.6 5.18e-14   NTclustered gi|15147293|ref|NC_003052.1| 109760 g217903 i0 74.249 1.74531835205993 233 53 86 6 15 243 924 695 Spizellomyces punctatus mitochondrion chromosome 1, complete sequence blastn 466 91.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
7670681 7670681 PRJEB11748_P_NODE_342347_length_201_cov_11.050000_g340164_i0 PRJEB11748 342347 201 11.05 22.2105 Polychytrium aggregatum 110093 Fungi Fungi 113 7.910000000000001e-21   NTclustered gi|2432131875|ref|XM_053109384.1| 110093 g340164 i0 97.015 3.78606965174129 67 2 33 0 23 89 360 426 Polychytrium aggregatum 40S ribosomal protein S20 (BJ171DRAFT_488555), mRNA blastn 761 113 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
8637725 8637725 PRJEB11748_P_NODE_356727_length_194_cov_5.263158_g354544_i0 PRJEB11748 356727 194 5.263158 10.21052652 Fungi 4751 Fungi Fungi 313 6.96e-81   NTclustered gi|290874455|gb|GQ160454.1| 64517 g354544 i0 99.419 88.639175257732 172 1 89 0 1 172 827 656 Rhizophlyctis rosea isolate BR 109 18S ribosomal RNA gene, partial sequence blastn 17196 313 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
11187409 11187409 PRJEB11748_P_NODE_283629_length_227_cov_29.385542_g281446_i0 PRJEB11748 283629 227 29.385542 66.70518034 Kochiomyces 117816 Fungi Fungi 342 1.07e-89   NTclustered gi|1866582533|gb|MT730708.1| 117817 g281446 i0 96.618 91.0308370044053 207 5 91 2 22 227 2660 2865 Kochiomyces dichotomus isolate JEL0371 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20664 342 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Kochiomyces Kochiomyces dichotomus
11493398 11493398 PRJEB11748_P_NODE_176030_length_306_cov_1.804082_g173847_i0 PRJEB11748 176030 306 1.804082 5.52049092 Spizellomyces punctatus 109760 Fungi Fungi 211 4.45e-50   NTclustered gi|1026980085|ref|XM_016752373.1| 645134 g173847 i0 80.139 1.86928104575163 287 54 93 3 1 285 497 212 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S15 (SPPG_04127), mRNA blastn 572 211 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
11497306 11497306 PRJEB11748_P_NODE_44990_length_643_cov_87.594502_g42908_i0 PRJEB11748 44990 643 87.594502 563.23264786 Thoreauomyces humboldtii 1396496 Fungi Fungi 215 4.43e-68   NR KAJ3015774.1 1396496 g42908 i0 68.2 0.690513219284603 148 46 69.1 1 566 123 1 147 KAJ3015774.1 Lactoylglutathione lyase [Thoreauomyces humboldtii] diamond 444 215 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Thoreauomyces Thoreauomyces humboldtii
15011231 15011231 PRJEB11748_P_NODE_190452_length_292_cov_3.593074_g188269_i0 PRJEB11748 190452 292 3.593074 10.49177608 Powellomycetaceae 1134080 Fungi Fungi 481 2.91e-131   NTclustered gi|1866582454|gb|MT730629.1| 109894 g188269 i0 98.529 93.1643835616438 272 4 93 0 1 272 4521 4250 Geranomyces variabilis isolate Barr350 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27204 481 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Geranomyces Geranomyces variabilis
15012610 15012610 PRJEB11748_P_NODE_380752_length_179_cov_4.601695_g378569_i0 PRJEB11748 380752 179 4.601695 8.23703405 Spizellomyces 4815 Fungi Fungi 202 1.42e-47   NTclustered gi|15147293|ref|NC_003052.1| 109760 g378569 i0 96.694 2.05586592178771 121 4 68 0 2 122 367 247 Spizellomyces punctatus mitochondrion chromosome 1, complete sequence blastn 368 202 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
15317025 15317025 PRJEB11748_P_NODE_146013_length_340_cov_6.469534_g143832_i0 PRJEB11748 146013 340 6.469534 21.9964156 Chytriomycetaceae sp. 2012318 Fungi Fungi 95.3 5.26e-15   NTclustered gi|2468791126|gb|OQ702950.1| 2012318 g143832 i0 87.356 25.8323529411765 87 6 25 4 255 340 4393 4475 Chytriomycetaceae sp. isolate PSC309 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8783 95.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae   Chytriomycetaceae sp.
15317676 15317676 PRJEB11748_P_NODE_176293_length_305_cov_12.881148_g174110_i0 PRJEB11748 176293 305 12.881148 39.2875014 Rhizophydiales sp. 2011922 Fungi Fungi 106 2.15e-18   NTclustered gi|2468791078|gb|OQ702937.1| 2011922 g174110 i0 80.255 2.72131147540984 157 17 51 6 25 180 656 799 Rhizophydiales sp. isolate PSC285 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 830 106 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales     Rhizophydiales sp.
16287385 16287385 PRJEB11748_P_NODE_374113_length_184_cov_6.162602_g371930_i0 PRJEB11748 374113 184 6.162602 11.33918768 Spizellomyces 4815 Fungi Fungi 169 1.4899999999999998e-37   NTclustered gi|15147293|ref|NC_003052.1| 109760 g371930 i0 86.503 2.55978260869565 163 11 89 2 1 163 1725 1574 Spizellomyces punctatus mitochondrion chromosome 1, complete sequence blastn 471 169 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
17869106 17869106 PRJEB11748_P_NODE_27735_length_849_cov_17.276650_g25969_i0 PRJEB11748 27735 849 17.27665 146.6787585 Fungi 4751 Fungi Fungi 219 1.6099999999999999e-68   NR XP_006680941.1 684364 g25969 i0 90.9 36.2614840989399 121 11 42.8 0 840 478 30 150 XP_006680941.1 uncharacterized protein BATDEDRAFT_90434 [Batrachochytrium dendrobatidis JAM81] diamond 30786 221 0.990950226244344 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
22968961 22968961 PRJEB11748_P_NODE_263859_length_238_cov_12.259887_g261676_i0 PRJEB11748 263859 238 12.259887 29.17853106 Chytriomycetaceae 1352827 Fungi Fungi 75.9 2.47e-15   NR KAJ3231220.1 4814 g261676 i0 60.3 7.70168067226891 68 24 84.5 3 217 17 75 140 KAJ3231220.1 40s ribosomal protein L44e [Chytriomyces hyalinus] diamond 1833 76.3 0.99475753604194 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
24239861 24239861 PRJEB11748_P_NODE_106460_length_404_cov_4.510204_g104286_i0 PRJEB11748 106460 404 4.510204 18.22122416 Powellomyces hirtus 109895 Fungi Fungi 226 2.1599999999999995e-54   NTclustered gi|1652151735|gb|MK292694.1| 109895 g104286 i0 89.071 0.829207920792079 183 18 82 2 223 404 99260 99441 Powellomyces hirtus strain CBS 809.83 mitochondrion blastn 335 226 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus
24243083 24243083 PRJEB11748_P_NODE_271500_length_234_cov_3.352601_g269317_i0 PRJEB11748 271500 234 3.352601 7.84508634 Powellomyces hirtus 109895 Fungi Fungi 342 1.11e-89   NTclustered gi|1652151693|gb|MK292693.1| 109895 g269317 i0 93.22 2.92735042735043 236 11 99 4 1 231 66116 66351 Powellomyces hirtus strain CBS 809.83 mitochondrion blastn 685 342 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus
27444093 27444093 PRJEB11748_P_NODE_359783_length_192_cov_25.687023_g357600_i0 PRJEB11748 359783 192 25.687023 49.31908416 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 90.9 2.06e-19   NR KAH9254398.1 1357716 g357600 i0 72.4 0.90625 58 13 85.9 1 24 188 806 863 KAH9254398.1 hypothetical protein BASA81_007511 [Batrachochytrium salamandrivorans] diamond 174 90.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
27728185 27728185 PRJEB11748_P_NODE_167724_length_314_cov_12.798419_g165541_i0 PRJEB11748 167724 314 12.798419 40.18703566 Borealophlyctis nickersoniae 2735257 Fungi Fungi 86.7 2.98e-17   NR KAJ3275968.1 2735257 g165541 i0 74 0.477707006369427 50 13 47.8 0 292 143 446 495 KAJ3275968.1 hypothetical protein HK104_003809 [Borealophlyctis nickersoniae] diamond 150 86.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Borealophlyctidaceae Borealophlyctis Borealophlyctis nickersoniae
28138687 28138687 PRJEB11748_P_NODE_51685_length_596_cov_6.910280_g49576_i0 PRJEB11748 51685 596 6.91028 41.1852688 Quaeritorhiza haematococci 2654861 Fungi Fungi 63.2 9.08e-8   NR KAJ3087548.1 2654861 g49576 i0 58.9 0.281879194630872 56 19 27.2 2 374 535 57 110 KAJ3087548.1 hypothetical protein HK102_010817 [Quaeritorhiza haematococci] diamond 168 63.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes   Quaeritorhizaceae Quaeritorhiza Quaeritorhiza haematococci
28574125 28574125 PRJEB11748_P_NODE_340227_length_202_cov_4.879433_g338044_i0 PRJEB11748 340227 202 4.879433 9.85645466 root 1 Root_unresolved Root_unresolved 43.1 0.0158   NR RKO88668.1 388810 g338044 i0 71.4 7.64851485148515 28 8 41.6 0 98 181 9 36 RKO88668.1 hypothetical protein BDK51DRAFT_36230 [Blyttiomyces helicus] diamond 1545 43.5 0.990804597701149 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes     Blyttiomyces Blyttiomyces helicus
28706748 28706748 PRJEB11748_P_NODE_221507_length_266_cov_5.590244_g219324_i0 PRJEB11748 221507 266 5.590244 14.87004904 Chytriomyces sp. MP71 1882861 Fungi Fungi 85.1 2.46e-19   NR KAI8611562.1 1882861 g219324 i0 60.3 5.33458646616541 63 25 71.1 0 189 1 6 68 KAI8611562.1 ubiquitin-like protein Atg12 [Chytriomyces sp. MP71] diamond 1419 85.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces sp. MP71
28921328 28921328 PRJEB11748_P_NODE_257528_length_242_cov_3.900552_g255345_i0 PRJEB11748 257528 242 3.900552 9.43933584 Fungi 4751 Fungi Fungi 120 5.500000000000001e-30   NR TPX70427.1 117820 g255345 i0 79.7 21.5702479338843 69 14 85.5 0 3 209 408 476 TPX70427.1 hypothetical protein SpCBS45565_g01760 [Spizellomyces sp. 'palustris'] diamond 5220 121 0.991735537190083 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces sp. 'palustris'
29748280 29748280 PRJEB11748_P_NODE_195891_length_287_cov_3.765487_g193708_i0 PRJEB11748 195891 287 3.765487 10.80694769 Gonapodya prolifera JEL478 1344416 Fungi Fungi 102 5.93e-26   NR KXS13505.1 1344416 g193708 i0 81.8 1.37979094076655 66 12 69 0 33 230 50 115 KXS13505.1 ribosomal protein L36e [Gonapodya prolifera JEL478] diamond 396 102 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Gonapodyaceae Gonapodya Gonapodya prolifera
30222386 30222386 PRJEB11748_P_NODE_264452_length_238_cov_3.570621_g262269_i0 PRJEB11748 264452 238 3.570621 8.49807798 Hyaloraphidium curvatum 82268 Fungi Fungi 90.9 4.68e-20   NR KAI9014143.1 82268 g262269 i0 68.3 4.73949579831933 63 16 74.4 1 2 178 197 259 KAI9014143.1 ribosomal family S4e-domain-containing protein [Hyaloraphidium curvatum] diamond 1128 90.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
30285982 30285982 PRJEB11748_P_NODE_15772_length_1180_cov_7.928508_g14463_i0 PRJEB11748 15772 1180 7.928508 93.5563944 Phlyctochytrium planicorne 261098 Fungi Fungi 78.6 1.03e-11   NR KAJ3099763.1 261098 g14463 i0 30.2 0.874576271186441 179 121 45 2 813 283 244 420 KAJ3099763.1 hypothetical protein HDU97_002789 [Phlyctochytrium planicorne] diamond 1032 78.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium planicorne
30569844 30569844 PRJEB11748_P_NODE_75693_length_484_cov_2.330969_g73536_i0 PRJEB11748 75693 484 2.330969 11.28188996 Boothiomyces sp. JEL 2170262 Fungi Fungi 155 1.58e-43   NR KAJ3320513.1 2724215 g73536 i0 81 0.520661157024793 84 16 52.1 0 481 230 148 231 KAJ3320513.1 snoRNA-binding rRNA-processing protein imp4 [Boothiomyces sp. JEL0866] diamond 252 155 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Terramycetaceae Boothiomyces Boothiomyces sp. JEL0866
31771083 31771083 PRJEB11748_P_NODE_118517_length_381_cov_7.559375_g116342_i0 PRJEB11748 118517 381 7.559375 28.80121875 Cladochytrium tenue 1604274 Fungi Fungi 105 7.399999999999998e-25   NR KAJ1543824.1 1604274 g116342 i0 51 1.50393700787402 96 47 75.6 0 3 290 189 284 KAJ1543824.1 hypothetical protein HK405_009045 [Cladochytrium tenue] diamond 573 105 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium tenue
31859770 31859770 PRJEB11748_P_NODE_233557_length_257_cov_33.448980_g231374_i0 PRJEB11748 233557 257 33.44898 85.9638786 Batrachochytrium 100474 Fungi Fungi 45.1 0.00682   NR KAL5033526.1 109871 g231374 i0 33.8 1.5875486381323 68 45 79.4 0 210 7 116 183 KAL5033526.1 hypothetical protein RTP6_001481 [Batrachochytrium dendrobatidis] diamond 408 45.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
32176560 32176560 PRJEB11748_P_NODE_55618_length_572_cov_4.317025_g53497_i0 PRJEB11748 55618 572 4.317025 24.693383 Chytridiomycetes 451435 Fungi Fungi 201 1.32e-60   NR KAJ3050614.1 64517 g53497 i0 59.2 3.28321678321678 157 59 82.3 1 572 102 148 299 KAJ3050614.1 hypothetical protein HK097_008393 [Rhizophlyctis rosea] diamond 1878 203 0.990147783251232 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;