RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB11748", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJEB11748 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3841544 3841544 PRJEB11748_P_NODE_174064_length_308_cov_1.935223_g171881_i0 PRJEB11748 174064 308 1.935223 5.96048684 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 52.8 0.029   NTclustered gi|551575493|ref|XM_005773412.1| 280463 g171881 i0 96.774 0.100649350649351 31 1 10 0 119 149 2762 2792 Emiliania huxleyi CCMP1516 hypothetical protein partial mRNA blastn 31 52.8 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
7668979 7668979 PRJEB11748_P_NODE_249447_length_247_cov_3.198925_g247264_i0 PRJEB11748 249447 247 3.198925 7.90134475 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 87.9 6.12e-13   NTclustered gi|551620813|ref|XM_005790866.1| 280463 g247264 i0 94.643 0.793522267206478 56 3 23 0 169 224 1069 1014 Emiliania huxleyi CCMP1516 hypothetical protein mRNA blastn 196 87.9 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;