RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where bioproject = "PRJEB11748", tax_clade = "Candidatus Pacearchaeota" and tax_kingdom = "Nanobdellati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 5 ✖

tax_clade 1

  • Candidatus Pacearchaeota · 5 ✖

bioproject 1

  • PRJEB11748 · 5 ✖

analysis 1

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28006038 28006038 PRJEB11748_P_NODE_124045_length_372_cov_3.617363_g121869_i0 PRJEB11748 124045 372 3.617363 13.45659036 root 1 Root_unresolved Root_unresolved 70.1 2.2e-11   NR MBS3075556.1 2026773 g121869 i0 43 2.29838709677419 79 44 63.7 1 29 265 64 141 MBS3075556.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 855 70.1 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
28769749 28769749 PRJEB11748_P_NODE_259927_length_241_cov_1.577778_g257744_i0 PRJEB11748 259927 241 1.577778 3.80244498 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 76.6 2.76e-15   NR MEM3091207.1 2026773 g257744 i0 79.5 0.547717842323652 44 9 54.8 0 86 217 75 118 MEM3091207.1 30S ribosomal protein S13 [Candidatus Pacearchaeota archaeon] diamond 132 76.6 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
29685070 29685070 PRJEB11748_P_NODE_162150_length_321_cov_1.773077_g159967_i0 PRJEB11748 162150 321 1.773077 5.69157717 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 48.1 4.88e-4   NR MCK9567864.1 2026773 g159967 i0 58.5 0.383177570093458 41 15 38.3 1 146 24 16 54 MCK9567864.1 macro domain-containing protein [Candidatus Pacearchaeota archaeon] diamond 123 48.1 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
32719625 32719625 PRJEB11748_P_NODE_158380_length_325_cov_4.564394_g156198_i0 PRJEB11748 158380 325 4.564394 14.8342805 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 80.5 2.34e-15   NR MBS3099534.1 2026773 g156198 i0 56.5 0.572307692307692 62 27 57.2 0 207 22 4 65 MBS3099534.1 Lrp/AsnC family transcriptional regulator [Candidatus Pacearchaeota archaeon] diamond 186 80.5 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
32719681 32719681 PRJEB11748_P_NODE_223820_length_264_cov_24.113300_g221637_i0 PRJEB11748 223820 264 24.1133 63.659112 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 94.7 3.9499999999999996e-23   NR RLG16576.1 2026773 g221637 i0 56.6 0.863636363636364 76 33 86.4 0 236 9 18 93 RLG16576.1 MAG: hypothetical protein DRN69_00505 [Candidatus Pacearchaeota archaeon] diamond 228 94.7 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;