RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB11748", tax_clade = "Caldisericota/Cryosericota group" and tax_kingdom = "Pseudomonadati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pseudomonadati · 4 ✖

tax_clade 1

  • Caldisericota/Cryosericota group · 4 ✖

bioproject 1

  • PRJEB11748 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27942781 27942781 PRJEB11748_P_NODE_269905_length_235_cov_2.649425_g267722_i0 PRJEB11748 269905 235 2.649425 6.22614875 Pseudomonadati 3379134 Bacteria Bacteria 42.4 0.00839   NR MCR4433944.1 2052147 g267722 i0 67.5 1.53191489361702 40 13 51.1 0 230 111 2 41 MCR4433944.1 hypothetical protein [Caldisericota bacterium] diamond 360 42.4 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota         Caldisericota bacterium
28201252 28201252 PRJEB11748_P_NODE_225626_length_263_cov_5.198020_g223443_i0 PRJEB11748 225626 263 5.19802 13.6707926 Caldisericum sp. 2499687 Bacteria Bacteria 53.5 7.08e-6   NR MCI4463313.1 2499687 g223443 i0 44.6 0.638783269961977 56 31 63.9 0 20 187 38 93 MCI4463313.1 hypothetical protein [Caldisericum sp.] diamond 168 53.5 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota Caldisericia Caldisericales Caldisericaceae Caldisericum Caldisericum sp.
30980872 30980872 PRJEB11748_P_NODE_149014_length_336_cov_7.061818_g146833_i0 PRJEB11748 149014 336 7.061818 23.72770848 Caldisericota bacterium 2052147 Bacteria Bacteria 81.6 2.57e-15   NR RLD17904.1 2052147 g146833 i0 43.6 1.66964285714286 94 51 82.1 1 36 311 1180 1273 RLD17904.1 MAG: hypothetical protein DRI36_02680, partial [Caldisericota bacterium] diamond 561 81.6 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota         Caldisericota bacterium
32404086 32404086 PRJEB11748_P_NODE_219719_length_267_cov_42.266990_g217536_i0 PRJEB11748 219719 267 42.26699 112.8528633 Caldisericota bacterium 2052147 Bacteria Bacteria 114 3.2200000000000004e-27   NR MCR4427988.1 2052147 g217536 i0 68.6 8.82022471910112 70 22 78.7 0 52 261 92 161 MCR4427988.1 formylmethanofuran dehydrogenase subunit A [Caldisericota bacterium] diamond 2355 114 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota         Caldisericota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;