RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB11748" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJEB11748 · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15321169 15321169 PRJEB11748_P_NODE_372733_length_185_cov_7.653226_g370550_i0 PRJEB11748 372733 185 7.653226 14.1584681 Mylnikovia oxoniensis 1314681 Root_unresolved Root_unresolved 84.2 5.6e-12   NTclustered gi|2206682162|gb|OM966635.1| 1314681 g370550 i0 86.076 39.9081081081081 79 9 42 2 1 77 4705 4627 Mylnikovia oxoniensis strain CCAP19012 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 7383 84.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Mylnikovia Mylnikovia oxoniensis
17561395 17561395 PRJEB11748_P_NODE_20974_length_1002_cov_246.010627_g19437_i0 PRJEB11748 20974 1002 246.010627 2465.02648254 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 206 7.37e-48   NTclustered gi|2206682169|gb|OM966642.1| 41120 g19437 i0 88.757 16.9121756487026 169 18 17 1 23 191 3800 3967 Apusomonas proboscidea strain MPSANABRIA15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16946 206 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Apusomonas Apusomonas proboscidea
27690476 27690476 PRJEB11748_P_NODE_333104_length_205_cov_2.430556_g330921_i0 PRJEB11748 333104 205 2.430556 4.9826398 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 68.9 9.79e-13   NR XP_013754322.1 461836 g330921 i0 85.3 2.28292682926829 34 5 49.8 0 202 101 115 148 XP_013754322.1 Fk506-binding protein [Thecamonas trahens ATCC 50062] diamond 468 69.3 0.994227994227994 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30601467 30601467 PRJEB11748_P_NODE_255693_length_243_cov_5.626374_g253510_i0 PRJEB11748 255693 243 5.626374 13.67208882 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 63.9 1.17e-9   NR XP_013762925.1 461836 g253510 i0 48.1 1.25925925925926 54 28 66.7 0 172 11 109 162 XP_013762925.1 cruzipain [Thecamonas trahens ATCC 50062] diamond 306 63.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;