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contig_metadata

29 rows where bioproject = "PRJEB11748", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 29 ✖

tax_clade 1

  • Amoebozoa · 29 ✖

bioproject 1

  • PRJEB11748 · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17409 17409 PRJEB11748_P_NODE_280001_length_229_cov_10.232143_g277818_i0 PRJEB11748 280001 229 10.232143 23.43160747 Acanthamoeba polyphaga 5757 Discosea other_Eukaryota 372 1.3799999999999997e-98   NTclustered gi|932090235|gb|KP054475.2| 5757 g277818 i0 99.51 72.3187772925764 204 1 89 0 26 229 2324 2527 Acanthamoeba polyphaga strain Linc Ap-1 mitochondrion, complete genome blastn 16561 372 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba polyphaga
18929 18929 PRJEB11748_P_NODE_368861_length_188_cov_3.582677_g366678_i0 PRJEB11748 368861 188 3.582677 6.73543276 Stenamoeba sp. HP839 1215627 Discosea other_Eukaryota 309 8.66e-80   NTclustered gi|399764210|gb|JQ271721.1| 1215627 g366678 i0 98.844 82.6010638297872 173 2 92 0 1 173 2035 2207 Stenamoeba sp. HP839 18S ribosomal RNA gene, partial sequence blastn 15529 309 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba sp. HP839
19036 19036 PRJEB11748_P_NODE_377601_length_181_cov_7.675000_g375418_i0 PRJEB11748 377601 181 7.675 13.89175 Vannella septentrionalis 197531 Discosea other_Eukaryota 230 6.62e-56   NTclustered gi|300078499|gb|GU001161.1| 197531 g375418 i0 92.547 63.353591160221 161 10 88 1 23 181 1007 1167 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11467 230 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
2259388 2259388 PRJEB11748_P_NODE_290322_length_224_cov_3.601227_g288139_i0 PRJEB11748 290322 224 3.601227 8.06674848 Acanthamoeba 5754 Discosea other_Eukaryota 409 1.03e-109   NTclustered gi|328751298|gb|JF437606.1| 5755 g288139 i0 99.556 100.446428571429 225 0 100 1 1 224 915 1139 Acanthamoeba castellanii strain T17c3 18S ribosomal RNA gene, partial sequence blastn 22500 409 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3844891 3844891 PRJEB11748_P_NODE_356564_length_194_cov_6.616541_g354381_i0 PRJEB11748 356564 194 6.616541 12.83608954 Ripella sp. 805 1217113 Discosea other_Eukaryota 294 2.52e-75   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g354381 i0 97.674 89.5927835051546 172 3 88 1 24 194 388 559 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 17381 294 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
6396327 6396327 PRJEB11748_P_NODE_325166_length_208_cov_3.129252_g322983_i0 PRJEB11748 325166 208 3.129252 6.50884416 Sappinia sp. CW-2015 1633019 Discosea other_Eukaryota 368 1.59e-97   NTclustered gi|803256538|gb|KP165392.1| 1633019 g322983 i0 98.558 98.1009615384615 208 3 100 0 1 208 13 220 Sappinia sp. CW-2015 18S ribosomal RNA gene, partial sequence blastn 20405 368 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Sappinia Sappinia sp. CW-2015
7669534 7669534 PRJEB11748_P_NODE_278947_length_230_cov_2.627219_g276764_i0 PRJEB11748 278947 230 2.627219 6.0426037 Paramoeba branchiphila 308475 Discosea other_Eukaryota 122 4.929999999999999e-31   NR ACO50132.1 308475 g276764 i0 77.5 3.66521739130435 71 16 92.6 0 16 228 148 218 ACO50132.1 elongation factor 1 alpha, partial [Paramoeba branchiphila] diamond 843 122 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
7672495 7672495 PRJEB11748_P_NODE_85147_length_454_cov_8.936387_g82982_i0 PRJEB11748 85147 454 8.936387 40.57119698 Acanthamoeba rhysodes 32599 Discosea other_Eukaryota 444 6.21e-120   NTclustered gi|33327248|gb|AF526434.1| 32599 g82982 i0 100 43.9735682819383 240 0 53 0 18 257 240 1 Acanthamoeba rhysodes strain 7AR internal transcribed spacer 1, complete sequence blastn 19964 444 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba rhysodes
8945718 8945718 PRJEB11748_P_NODE_362128_length_191_cov_9.638462_g359945_i0 PRJEB11748 362128 191 9.638462 18.40946242 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 126 9.54e-25   NTclustered gi|470524229|ref|XM_004356402.1| 1257118 g359945 i0 95.062 0.424083769633508 81 3 42 1 68 147 668 588 Acanthamoeba castellanii str. Neff nicotinate phosphoribosyltransferase (ACA1_171280), partial mRNA blastn 81 126 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8947010 8947010 PRJEB11748_P_NODE_74528_length_488_cov_4.086651_g72374_i0 PRJEB11748 74528 488 4.086651 19.94285688 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 399 1.4799999999999999e-106   NTclustered gi|470400375|ref|XM_004335452.1| 1257118 g72374 i0 97.436 0.536885245901639 234 6 48 0 233 466 4027 3794 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_246500), partial mRNA blastn 262 399 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9912554 9912554 PRJEB11748_P_NODE_324928_length_208_cov_4.115646_g322745_i0 PRJEB11748 324928 208 4.115646 8.56054368 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 108 3.83e-19   NTclustered gi|300078498|gb|GU001160.1| 5755 g322745 i0 96.875 31.9086538461538 64 2 31 0 24 87 5146 5209 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6637 108 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10216799 10216799 PRJEB11748_P_NODE_110649_length_395_cov_36.257485_g108475_i0 PRJEB11748 110649 395 36.257485 143.21706575 Thecamoeba vumurta 2893587 Discosea other_Eukaryota 344 5.57e-90   NTclustered gi|2130839581|gb|OL423099.1| 2893587 g108475 i0 85.801 0.921518987341772 331 39 82 8 71 395 1017 1345 Thecamoeba vumurta strain Ta130 small subunit ribosomal RNA gene, partial sequence blastn 364 344 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba vumurta
12462474 12462474 PRJEB11748_P_NODE_185790_length_296_cov_6.604255_g183607_i0 PRJEB11748 185790 296 6.604255 19.5485948 Acanthamoeba 5754 Discosea other_Eukaryota 496 1.06e-135   NTclustered gi|28194563|gb|AF479507.1| 5756 g183607 i0 99.631 85.4493243243243 271 1 92 0 25 295 572 842 Acanthamoeba sp. strain LVPEI 773 96 16S small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product blastn 25293 496 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
12767647 12767647 PRJEB11748_P_NODE_115091_length_387_cov_6.990798_g112917_i0 PRJEB11748 115091 387 6.990798 27.05438826 Vannella sp. ACN1 1215628 Discosea other_Eukaryota 553 8.309999999999998e-153   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g112917 i0 94.199 93.0103359173127 362 21 94 0 15 376 1761 1400 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 35995 553 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1
15320088 15320088 PRJEB11748_P_NODE_303793_length_217_cov_27.423077_g301610_i0 PRJEB11748 303793 217 27.423077 59.50807709 Stenamoeba sardiniensis 1445713 Discosea other_Eukaryota 309 1.03e-79   NTclustered gi|574484042|gb|KF547921.1| 1445713 g301610 i0 98.844 57.3640552995392 173 2 80 0 6 178 596 424 Stenamoeba sardiniensis strain 17 18S ribosomal RNA gene, partial sequence blastn 12448 309 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba sardiniensis
16286547 16286547 PRJEB11748_P_NODE_257573_length_242_cov_3.635359_g255390_i0 PRJEB11748 257573 242 3.635359 8.79756878 Acanthamoeba 5754 Discosea other_Eukaryota 409 1.12e-109   NTclustered gi|1718348710|gb|MK390873.1| 5756 g255390 i0 100 91.3719008264463 221 0 91 0 22 242 53 273 Acanthamoeba sp. isolate LT-16-Q2-D 18S ribosomal RNA gene, partial sequence blastn 22112 409 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
18835330 18835330 PRJEB11748_P_NODE_208835_length_276_cov_6.279070_g206652_i0 PRJEB11748 208835 276 6.27907 17.3302332 Acanthamoeba 5754 Discosea other_Eukaryota 473 4.569999999999999e-129   NTclustered gi|507399|gb|U07403.1|ACU07403 5755 g206652 i0 99.237 94.963768115942 262 2 95 0 1 262 1835 2096 Acanthamoeba castellanii CDC:0786:V042 18S rRNA gene blastn 26210 473 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20109942 20109942 PRJEB11748_P_NODE_189856_length_292_cov_42.943723_g187673_i0 PRJEB11748 189856 292 42.943723 125.39567116 Acanthamoeba 5754 Discosea other_Eukaryota 448 2.9499999999999995e-121   NTclustered gi|28194590|gb|AF479534.1| 5756 g187673 i0 100 77.1986301369863 242 0 83 0 51 292 186 427 Acanthamoeba sp. strain VE67/H7 16S small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product blastn 22542 448 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
20415406 20415406 PRJEB11748_P_NODE_147597_length_338_cov_4.093863_g145416_i0 PRJEB11748 147597 338 4.093863 13.83725694 Ripella platypodia 2047821 Discosea other_Eukaryota 503 7.33e-138   NTclustered gi|1269228378|gb|MF683503.1| 2047821 g145416 i0 97.931 86.7751479289941 290 6 86 0 32 321 1236 1525 Ripella platypodia clone 26.10.41 18S ribosomal RNA gene, partial sequence blastn 29330 503 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
20416224 20416224 PRJEB11748_P_NODE_186857_length_295_cov_7.307692_g184674_i0 PRJEB11748 186857 295 7.307692 21.5576914 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 254 6.99e-63   NTclustered gi|470525983|ref|XM_004356629.1| 1257118 g184674 i0 97.959 10.6033898305085 147 2 50 1 13 159 311 456 Acanthamoeba castellanii str. Neff ribosomal protein S15, putative (ACA1_174430), partial mRNA blastn 3128 254 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20417074 20417074 PRJEB11748_P_NODE_229357_length_260_cov_15.939698_g227174_i0 PRJEB11748 229357 260 15.939698 41.4432148 Thecamoeba quadrilineata 343530 Discosea other_Eukaryota 213 1.03e-50   NTclustered gi|2386968834|ref|NC_068853.1| 343530 g227174 i0 85.922 0.792307692307692 206 21 78 8 23 225 10358 10558 Thecamoeba quadrilineata mitochondrion, complete genome blastn 206 213 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba quadrilineata
22660432 22660432 PRJEB11748_P_NODE_197918_length_285_cov_7.383929_g195735_i0 PRJEB11748 197918 285 7.383929 21.04419765 Acanthamoeba 5754 Discosea other_Eukaryota 527 3.59e-145   NTclustered gi|2449941075|gb|OQ534280.1| 5756 g195735 i0 100 99.7649122807018 285 0 100 0 1 285 557 841 Acanthamoeba sp. strain NR5-2 small subunit ribosomal RNA gene, partial sequence blastn 28433 527 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
22966304 22966304 PRJEB11748_P_NODE_127919_length_366_cov_2.668852_g125742_i0 PRJEB11748 127919 366 2.668852 9.76799832 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 516 1.03e-141   NTclustered gi|354720325|gb|HQ687484.1| 1105345 g125742 i0 93.714 39.6885245901639 350 12 94 10 23 366 541 886 Vexillifera bacillipedes strain TIL2 small subunit ribosomal RNA gene, partial sequence blastn 14526 516 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
23935735 23935735 PRJEB11748_P_NODE_185959_length_296_cov_4.187234_g183776_i0 PRJEB11748 185959 296 4.187234 12.39421264 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 73.1 2.11e-8   NTclustered gi|206570201|gb|EU719190.1| 561864 g183776 i0 97.619 4.0472972972973 42 1 14 0 49 90 131 172 Mayorella gemmifera strain CCAP 1547/8 small subunit ribosomal RNA gene, partial sequence blastn 1198 73.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella gemmifera
24246326 24246326 PRJEB11748_P_NODE_94180_length_431_cov_3.813514_g92012_i0 PRJEB11748 94180 431 3.813514 16.43624534 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 291 8.1e-74   NTclustered gi|470395970|ref|XM_004335072.1| 1257118 g92012 i0 92.683 0.719257540603248 205 9 72 1 23 227 1585 1783 Acanthamoeba castellanii str. Neff phospholipidtranslocating P-type ATPase (ACA1_098040), partial mRNA blastn 310 291 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26589269 26589269 PRJEB11748_P_NODE_130521_length_362_cov_3.056478_g128344_i0 PRJEB11748 130521 362 3.056478 11.06445036 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 159 4.7299999999999996e-48   NR XP_004352812.1 1257118 g128344 i0 81.1 8.17127071823204 90 17 74.6 0 48 317 1 90 XP_004352812.1 ribosomal L37ae protein family [Acanthamoeba castellanii str. Neff] diamond 2958 159 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28043721 28043721 PRJEB11748_P_NODE_75645_length_484_cov_4.063830_g73488_i0 PRJEB11748 75645 484 4.06383 19.6689372 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 207 5.24e-60   NR XP_004333952.1 1257118 g73488 i0 80 0.712809917355372 115 23 71.3 0 428 84 594 708 XP_004333952.1 TBC domain containing protein [Acanthamoeba castellanii str. Neff] diamond 345 207 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28643579 28643579 PRJEB11748_P_NODE_113927_length_389_cov_14.164634_g111753_i0 PRJEB11748 113927 389 14.164634 55.10042626 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 69.3 9.25e-11   NR XP_004356447.1 1257118 g111753 i0 52.5 0.470437017994859 61 28 47 1 361 179 522 581 XP_004356447.1 VATPase subunit A, putative [Acanthamoeba castellanii str. Neff] diamond 183 69.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28832853 28832853 PRJEB11748_P_NODE_194988_length_288_cov_2.449339_g192805_i0 PRJEB11748 194988 288 2.449339 7.05409632 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 44.3 0.0184   NR XP_004338502.1 1257118 g192805 i0 29.6 0.739583333333333 71 50 74 0 36 248 380 450 XP_004338502.1 ubiquitin domain containing protein [Acanthamoeba castellanii str. Neff] diamond 213 44.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;