RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB11523" and tax_phylum = "Candidatus Parcubacteria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 5 ✖

tax_clade 1

bioproject 1

  • PRJEB11523 · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15315992 15315992 PRJEB11523_P_NODE_6833_length_175_cov_15.079365_g6755_i0 PRJEB11523 6833 175 15.079365 26.38888875 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 69.4 1.46e-7   NTclustered gi|2314735967|dbj|AP024681.1| 2762014 g6755 i0 100 0.211428571428571 37 0 21 0 116 152 167790 167754 MAG: Candidatus Parcubacteria bacterium KatS3mg097 DNA, complete genome blastn 37 69.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
27317414 27317414 PRJEB11523_P_NODE_5443_length_199_cov_4.186667_g5365_i0 PRJEB11523 5443 199 4.186667 8.33146733 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 63.5 1.43e-10   NR MBC7981477.1 2762014 g5365 i0 76.1 0.693467336683417 46 10 67.8 1 10 144 115 160 MBC7981477.1 30S ribosomal protein S6 [Candidatus Parcubacteria bacterium] diamond 138 63.5 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
27412256 27412256 PRJEB11523_P_NODE_323_length_1069_cov_4.487255_g274_i0 PRJEB11523 323 1069 4.487255 47.96875595 Parcubacteria bacterium C7867- 2762014 Bacteria Bacteria 575 2.31e-203   NR KND50256.1 1659197 g274 i0 78.8 3.9176800748363 349 74 97.9 0 1 1047 80 428 KND50256.1 MAG: putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase [Parcubacteria bacterium C7867-003] diamond 4188 575 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-003
27437718 27437718 PRJEB11523_P_NODE_3543_length_260_cov_1.388626_g3465_i0 PRJEB11523 3543 260 1.388626 3.6104276 Bacteria 2 Bacteria Bacteria 147 4.22e-41   NR KND49018.1 1659199 g3465 i0 92.4 26.3192307692308 79 6 91.2 0 258 22 61 139 KND49018.1 MAG: rod shape-determining protein MreB [Parcubacteria bacterium C7867-005] diamond 6843 147 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-005
30601344 30601344 PRJEB11523_P_NODE_1893_length_398_cov_2.627507_g1815_i0 PRJEB11523 1893 398 2.627507 10.45747786 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 61.2 4.45e-8   NR MBI3305473.1 2762014 g1815 i0 39.1 1.25125628140704 69 42 52 0 306 100 211 279 MBI3305473.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 498 61.2 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;