contig_metadata
6 rows where bioproject = "PRJEB11523" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12461635 | 12461635 | PRJEB11523_P_NODE_7550_length_167_cov_0.864407_g7472_i0 | PRJEB11523 | 7550 | 167 | 0.864407 | 1.44355969 | Sulfurospirillum | 57665 | Bacteria | Bacteria | 176 | 7.969999999999999e-40 | NTclustered | gi|1729059542|gb|CP042966.1| | 66821 | g7472 | i0 | 88.514 | 2.69461077844311 | 148 | 14 | 87 | 1 | 1 | 145 | 973540 | 973687 | Sulfurospirillum multivorans strain N chromosome, complete genome | blastn | 450 | 176 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum multivorans | ||
| 12767313 | 12767313 | PRJEB11523_P_NODE_6651_length_178_cov_2.077519_g6573_i0 | PRJEB11523 | 6651 | 178 | 2.077519 | 3.69798382 | uncultured Aliarcobacter sp. | 2321118 | Bacteria | Bacteria | 278 | 2.28e-70 | NTclustered | gi|2621785459|emb|OY781917.1| | 2321118 | g6573 | i0 | 99.346 | 323.938202247191 | 153 | 1 | 86 | 0 | 24 | 176 | 1466268 | 1466116 | MAG: uncultured Aliarcobacter sp. isolate 35e71162-57ce-4606-8f28-3f72018c63bd genome assembly, chromosome: 2 | blastn | 57661 | 278 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | uncultured Aliarcobacter sp. | ||
| 15010377 | 15010377 | PRJEB11523_P_NODE_5352_length_201_cov_7.828947_g5274_i0 | PRJEB11523 | 5352 | 201 | 7.828947 | 15.73618347 | Sulfurospirillum | 57665 | Bacteria | Bacteria | 171 | 4.6299999999999996e-38 | NTclustered | gi|1729059542|gb|CP042966.1| | 66821 | g5274 | i0 | 87.013 | 1.67164179104478 | 154 | 17 | 75 | 2 | 27 | 177 | 969451 | 969604 | Sulfurospirillum multivorans strain N chromosome, complete genome | blastn | 336 | 171 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum multivorans | ||
| 29716640 | 29716640 | PRJEB11523_P_NODE_3470_length_264_cov_2.046512_g3392_i0 | PRJEB11523 | 3470 | 264 | 2.046512 | 5.40279168 | uncultured Arcobacter sp. | 165434 | Bacteria | Bacteria | 76.6 | 1.78e-15 | NR | WP_298752127.1 | 165434 | g3392 | i0 | 50.7 | 2.23863636363636 | 73 | 34 | 83 | 1 | 46 | 264 | 17 | 87 | WP_298752127.1 hypothetical protein [uncultured Arcobacter sp.] | diamond | 591 | 76.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | uncultured Arcobacter sp. | ||
| 30980835 | 30980835 | PRJEB11523_P_NODE_1374_length_491_cov_4.056561_g1296_i0 | PRJEB11523 | 1374 | 491 | 4.056561 | 19.91771451 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 48.9 | 0.00244 | NR | TXH43637.1 | 2482794 | g1296 | i0 | 60 | 0.213849287169043 | 35 | 14 | 21.4 | 0 | 207 | 103 | 191 | 225 | TXH43637.1 MAG: hypothetical protein E6Q97_33795, partial [Desulfurellales bacterium] | diamond | 105 | 48.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 31897638 | 31897638 | PRJEB11523_P_NODE_3577_length_257_cov_25.192308_g3499_i0 | PRJEB11523 | 3577 | 257 | 25.192308 | 64.74423156 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 149 | 3.5899999999999998e-40 | NR | TXH58632.1 | 2482794 | g3499 | i0 | 92 | 0.875486381322957 | 75 | 6 | 87.5 | 0 | 28 | 252 | 169 | 243 | TXH58632.1 MAG: hypothetical protein E6Q97_01875 [Desulfurellales bacterium] | diamond | 225 | 149 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;