RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJEB11523", tax_kingdom = "Nanobdellati" and tax_phylum = "Nanobdellota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 3 ✖

tax_kingdom 1

  • Nanobdellati · 3 ✖

bioproject 1

  • PRJEB11523 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28327522 28327522 PRJEB11523_P_NODE_1446_length_476_cov_2.833724_g1368_i0 PRJEB11523 1446 476 2.833724 13.48852624 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 49.7 0.00136   NR HLC62344.1 2910166 g1368 i0 24.7 1.07142857142857 170 91 95.2 5 457 5 29 180 HLC62344.1 hypothetical protein [Candidatus Nanoarchaeia archaeon] diamond 510 49.7 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
29274713 29274713 PRJEB11523_P_NODE_5269_length_203_cov_10.922078_g5191_i0 PRJEB11523 5269 203 10.922078 22.17181834 Nanobdellota archaeon 2026764 Archaea Archaea 87.8 1.91e-19   NR MDP3698550.1 2026764 g5191 i0 80.6 0.916256157635468 62 12 91.6 0 4 189 153 214 MDP3698550.1 hypothetical protein [Nanoarchaeota archaeon] diamond 186 87.8 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29805437 29805437 PRJEB11523_P_NODE_891_length_638_cov_3.972835_g819_i0 PRJEB11523 891 638 3.972835 25.3466873 Archaea 2157 Archaea Archaea 236 9.32e-68   NR MEK6858731.1 2026764 g819 i0 55 3.89811912225705 211 90 97.3 3 631 11 21 230 MEK6858731.1 hypothetical protein [Nanoarchaeota archaeon] diamond 2487 237 0.9957805907173 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;