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contig_metadata

11 rows where bioproject = "PRJEB11523", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 11 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 11 ✖

bioproject 1

  • PRJEB11523 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10216520 10216520 PRJEB11523_P_NODE_4609_length_219_cov_6.776471_g4531_i0 PRJEB11523 4609 219 6.776471 14.84047149 Luteolibacter luteus 2728835 Bacteria Bacteria 257 3.83e-64   NTclustered gi|1835317346|gb|CP051774.1| 2728835 g4531 i0 95.122 221.433789954338 164 6 74 1 22 183 3804904 3805067 Luteolibacter luteus strain G-1-1-1 chromosome, complete genome blastn 48494 257 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter luteus
18834307 18834307 PRJEB11523_P_NODE_3275_length_274_cov_22.982222_g3197_i0 PRJEB11523 3275 274 22.982222 62.97128828 Bacteria 2 Bacteria Bacteria 90.5 8.97e-19   NR OJV03634.1 1895866 g3197 i0 51.8 3.64598540145985 83 35 90.9 2 26 274 877 954 OJV03634.1 MAG: hypothetical protein BGO12_03755 [Verrucomicrobia bacterium 61-8] diamond 999 90.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobia bacterium 61-8
28454119 28454119 PRJEB11523_P_NODE_8386_length_162_cov_1.805310_g8308_i0 PRJEB11523 8386 162 1.80531 2.9246022 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 98.2 2.91e-22   NR HEV7403817.1 2811408 g8308 i0 84.9 0.981481481481482 53 8 98.1 0 3 161 262 314 HEV7403817.1 glycosyltransferase [Chthoniobacteraceae bacterium] diamond 159 98.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
28959374 28959374 PRJEB11523_P_NODE_3068_length_287_cov_1.714286_g2990_i0 PRJEB11523 3068 287 1.714286 4.92000082 Candidatus Udaeobacter sp. 2665650 Bacteria Bacteria 50.1 4.18e-5   NR HEY6154670.1 2665650 g2990 i0 37.3 0.700348432055749 67 25 70 2 19 219 46 95 HEY6154670.1 hypothetical protein [Candidatus Udaeobacter sp.] diamond 201 50.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Candidatus Udaeobacter Candidatus Udaeobacter sp.
29369656 29369656 PRJEB11523_P_NODE_8589_length_161_cov_1.750000_g8511_i0 PRJEB11523 8589 161 1.75 2.8175 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 65.5 7.28e-11   NR RYD66306.1 2026800 g8511 i0 56.9 0.950310559006211 51 22 95 0 9 161 147 197 RYD66306.1 MAG: hypothetical protein EOP83_05405 [Verrucomicrobiaceae bacterium] diamond 153 65.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
29463902 29463902 PRJEB11523_P_NODE_4290_length_230_cov_2.712707_g4212_i0 PRJEB11523 4290 230 2.712707 6.2392261 Nibricoccus sp. 2576892 Bacteria Bacteria 100 1.4100000000000001e-22   NR MFT3868947.1 2576892 g4212 i0 85.3 0.88695652173913 68 10 88.7 0 16 219 60 127 MFT3868947.1 fibronectin type III domain-containing protein [Nibricoccus sp.] diamond 204 100 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Nibricoccus Nibricoccus sp.
29837004 29837004 PRJEB11523_P_NODE_7691_length_166_cov_0.871795_g7613_i0 PRJEB11523 7691 166 0.871795 1.4471797 Bacteria 2 Bacteria Bacteria 95.1 4.51e-21   NR MEI8044547.1 2026799 g7613 i0 79.6 6.83132530120482 54 11 97.6 0 164 3 490 543 MEI8044547.1 alpha-amylase family glycosyl hydrolase [Verrucomicrobiota bacterium] diamond 1134 95.5 0.995811518324607 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30506742 30506742 PRJEB11523_P_NODE_2433_length_336_cov_10.163763_g2355_i0 PRJEB11523 2433 336 10.163763 34.15024368 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 69.7 2.16e-11   NR MES2694486.1 2026799 g2355 i0 47.2 0.642857142857143 72 30 57.1 1 315 124 214 285 MES2694486.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 216 69.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30664655 30664655 PRJEB11523_P_NODE_2313_length_348_cov_12.036789_g2235_i0 PRJEB11523 2313 348 12.036789 41.88802572 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 53.1 2.82e-6   NR HZV36620.1 2499141 g2235 i0 44.2 0.663793103448276 77 34 58.6 3 48 251 30 106 HZV36620.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 231 53.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31549964 31549964 PRJEB11523_P_NODE_6156_length_186_cov_5.211679_g6078_i0 PRJEB11523 6156 186 5.211679 9.69372294 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 82 1.62e-16   NR MDH4454360.1 2026799 g6078 i0 72.3 0.758064516129032 47 13 75.8 0 31 171 1 47 MDH4454360.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 141 82 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32656232 32656232 PRJEB11523_P_NODE_3320_length_271_cov_20.387387_g3242_i0 PRJEB11523 3320 271 20.387387 55.24981877 Verrucomicrobia bacterium TMED56 1986792 Bacteria Bacteria 87 1.39e-19   NR OUU45232.1 1986792 g3242 i0 51.3 0.885608856088561 80 36 85.2 1 28 258 50 129 OUU45232.1 MAG: hypothetical protein CBC16_01365 [Verrucomicrobia bacterium TMED56] diamond 240 87 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobia bacterium TMED56

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;