RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB11523", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJEB11523 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27437719 27437719 PRJEB11523_P_NODE_5123_length_206_cov_16.745223_g5045_i0 PRJEB11523 5123 206 16.745223 34.49515938 Bacteria 2 Bacteria Bacteria 113 3.6800000000000005e-27   NR OGV18181.1 1798570 g5045 i0 85.2 5.16990291262136 61 9 88.8 0 184 2 99 159 OGV18181.1 MAG: restriction endonuclease [Lentisphaerae bacterium GWF2_38_69] diamond 1065 114 0.991228070175439 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium GWF2_38_69
29243358 29243358 PRJEB11523_P_NODE_6569_length_179_cov_14.676923_g6491_i0 PRJEB11523 6569 179 14.676923 26.27169217 Lentisphaerota bacterium 1932692 Bacteria Bacteria 59.3 2.21e-8   NR MCP3965836.1 1932692 g6491 i0 49 0.854748603351955 51 26 85.5 0 25 177 205 255 MCP3965836.1 winged helix-turn-helix domain-containing protein [Lentisphaerota bacterium] diamond 153 59.3 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;