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contig_metadata

8 rows where bioproject = "PRJEB11523", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 8 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 8 ✖

bioproject 1

  • PRJEB11523 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6391882 6391882 PRJEB11523_P_NODE_1066_length_574_cov_3.611429_g990_i0 PRJEB11523 1066 574 3.6114289999999998 20.72960246 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 83.2 9.62e-15   NR MDD2702835.1 2035772 g990 i0 39.2 0.97212543554007 186 98 90.4 8 28 546 528 711 MDD2702835.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 558 83.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28138459 28138459 PRJEB11523_P_NODE_265_length_1145_cov_4.692518_g226_i0 PRJEB11523 265 1145 4.692518 53.7293311 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 80.1 2.58e-12   NR MCD4780310.1 2035772 g226 i0 28.7 0.877729257641921 164 112 42.2 3 502 20 8 169 MCD4780310.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 1005 80.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28895850 28895850 PRJEB11523_P_NODE_2628_length_318_cov_2.661710_g2550_i0 PRJEB11523 2628 318 2.66171 8.4642378 Candidatus Omnitrophica bacterium CG1_ 2035772 Bacteria Bacteria 64.3 2.26e-9   NR OIO38083.1 1805290 g2550 i0 35.6 0.952830188679245 101 65 95.3 0 8 310 123 223 OIO38083.1 MAG: hypothetical protein AUJ71_03905 [Candidatus Omnitrophica bacterium CG1_02_49_16] diamond 303 64.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium CG1_02_49_16
29969520 29969520 PRJEB11523_P_NODE_3651_length_254_cov_9.834146_g3573_i0 PRJEB11523 3651 254 9.834146 24.97873084 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 137 1.67e-37   NR MBI4309835.1 2035772 g3573 i0 86.3 1.85433070866142 80 11 94.5 0 240 1 242 321 MBI4309835.1 phosphate acyltransferase PlsX [Candidatus Omnitrophota bacterium] diamond 471 137 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30380698 30380698 PRJEB11523_P_NODE_5833_length_191_cov_13.161972_g5755_i0 PRJEB11523 5833 191 13.161972 25.13936652 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 97.1 8.52e-22   NR MCK5581077.1 2035772 g5755 i0 83.9 0.879581151832461 56 9 88 0 169 2 301 356 MCK5581077.1 glycine--tRNA ligase [Candidatus Omnitrophota bacterium] diamond 168 97.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30563438 30563438 PRJEB11523_P_NODE_8433_length_162_cov_1.044248_g8355_i0 PRJEB11523 8433 162 1.044248 1.69168176 Bacteria 2 Bacteria Bacteria 88.6 1.26e-19   NR MBI4335213.1 2035772 g8355 i0 75 3.85185185185185 52 13 96.3 0 2 157 17 68 MBI4335213.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 624 88.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31012214 31012214 PRJEB11523_P_NODE_4115_length_236_cov_1.919786_g4037_i0 PRJEB11523 4115 236 1.919786 4.53069496 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 97.4 7.65e-25   NR MDE1921364.1 2035772 g4037 i0 86.8 2.70762711864407 53 7 67.4 0 173 15 1 53 MDE1921364.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Candidatus Omnitrophota bacterium] diamond 639 97.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32119269 32119269 PRJEB11523_P_NODE_1718_length_426_cov_22.302387_g1640_i0 PRJEB11523 1718 426 22.302387 95.00816862 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 65.1 2.53e-9   NR HAM40744.1 2035772 g1640 i0 57.7 0.366197183098592 52 22 36.6 0 406 251 17 68 HAM40744.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 156 65.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;