RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB11523", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJEB11523 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29148980 29148980 PRJEB11523_P_NODE_3529_length_260_cov_20.620853_g3451_i0 PRJEB11523 3529 260 20.620853 53.6142178 Aplysia californica 6500 Mollusca Mollusca 43.1 0.0349   NR AVD53847.1 6500 g3451 i0 40 0.807692307692308 70 37 77.3 3 36 236 1399 1466 AVD53847.1 Cav2 calcium channel alpha subunit [Aplysia californica] diamond 210 43.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
31670045 31670045 PRJEB11523_P_NODE_3097_length_285_cov_3.080508_g3019_i0 PRJEB11523 3097 285 3.080508 8.7794478 Opisthokonta 33154 Mollusca Mollusca 45.4 0.0066   NR XP_059170736.1 109671 g3019 i0 40.8 5.2 49 25 47.4 1 8 142 257 305 XP_059170736.1 glutamate-rich WD repeat-containing protein 1-like [Physella acuta] diamond 1482 45.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;