RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB11523", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 6 ✖

bioproject 1

  • PRJEB11523 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10216510 10216510 PRJEB11523_P_NODE_3669_length_253_cov_20.377451_g3591_i0 PRJEB11523 3669 253 20.377451 51.55495103 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 62.1 3.81e-5   NTclustered gi|2729078193|ref|XM_065201444.1| 499914 g3591 i0 100 0.130434782608696 33 0 13 0 78 110 1792 1760 PREDICTED: Rhopilema esculentum serine/threonine-protein kinase 40-like (LOC135685480), mRNA blastn 33 62.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
20109040 20109040 PRJEB11523_P_NODE_6436_length_181_cov_5.393939_g6358_i0 PRJEB11523 6436 181 5.393939 9.76302959 Cnidaria 6073 Cnidaria other_Eukaryota 122 1.16e-23   NTclustered gi|1347759488|gb|MG979306.1| 340365 g6358 i0 89.32 53.0773480662983 103 4 55 5 1 100 195 97 Scolionema suvaense isolate AGC0509 large subunit ribosomal RNA gene, partial sequence blastn 9607 122 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Limnomedusae Olindiidae Scolionema Scolionema suvaense
27759651 27759651 PRJEB11523_P_NODE_3344_length_270_cov_2.190045_g3266_i0 PRJEB11523 3344 270 2.190045 5.9131215 Actinostola sp. cb2 3060491 Cnidaria other_Eukaryota 48.1 6.3e-4   NR KAK3718960.1 3060491 g3266 i0 39.3 0.988888888888889 89 43 92.2 3 250 2 412 495 KAK3718960.1 hypothetical protein QZH41_017573, partial [Actinostola sp. cb2023] diamond 267 48.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actinostolidae Actinostola Actinostola sp. cb2023
29117189 29117189 PRJEB11523_P_NODE_3229_length_277_cov_1.679825_g3151_i0 PRJEB11523 3229 277 1.679825 4.65311525 Paramuricea clavata 317549 Cnidaria other_Eukaryota 50.4 8.47e-5   NR CAB4041414.1 317549 g3151 i0 54.8 0.454873646209386 42 17 45.5 1 152 277 37 76 CAB4041414.1 Hypothetical predicted protein [Paramuricea clavata] diamond 126 50.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
30121274 30121274 PRJEB11523_P_NODE_4392_length_226_cov_9.649718_g4314_i0 PRJEB11523 4392 226 9.649718 21.80836268 root 1 Root_unresolved Root_unresolved 56.2 5.22e-7   NR XP_065665725.1 6087 g4314 i0 41.5 1.7787610619469 65 38 86.3 0 204 10 361 425 XP_065665725.1 uncharacterized protein LOC136087146 [Hydra vulgaris] diamond 402 56.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
31423162 31423162 PRJEB11523_P_NODE_4176_length_234_cov_1.627027_g4098_i0 PRJEB11523 4176 234 1.627027 3.80724318 Stylophora pistillata 50429 Cnidaria other_Eukaryota 42 0.0424   NR PFX12617.1 50429 g4098 i0 35.8 0.67948717948718 53 32 67.9 1 40 198 27 77 PFX12617.1 hypothetical protein AWC38_SpisGene23392 [Stylophora pistillata] diamond 159 42 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;