RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB11523", tax_clade = "Luna-1 subcluster" and tax_kingdom = "Bacillati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bacillati · 2 ✖

tax_clade 1

  • Luna-1 subcluster · 2 ✖

bioproject 1

  • PRJEB11523 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4810446 4810446 PRJEB11523_P_NODE_4544_length_221_cov_8.279070_g4466_i0 PRJEB11523 4544 221 8.27907 18.2967447 Rhodoluna 529883 Bacteria Bacteria 329 8.08e-86   NTclustered gi|1666461687|gb|CP040509.1| 232537 g4466 i0 96.939 91.6561085972851 196 6 89 0 17 212 476833 477028 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 20256 329 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila
28454120 28454120 PRJEB11523_P_NODE_886_length_640_cov_15.040609_g814_i0 PRJEB11523 886 640 15.040609 96.2598976 Rhodoluna sp. 1969481 Bacteria Bacteria 354 2.06e-120   NR MBP7835836.1 1969481 g814 i0 97.8 0.8484375 181 4 84.8 0 627 85 134 314 MBP7835836.1 NUDIX hydrolase [Rhodoluna sp.] diamond 543 354 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;