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contig_metadata

33 rows where bioproject = "PRJEB10320", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 33 ✖

tax_kingdom 1

  • Metazoa · 33 ✖

tax_clade 1

bioproject 1

  • PRJEB10320 · 33 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1287778 1287778 PRJEB10320_P_NODE_15022_length_235_cov_2.135000_g14764_i0 PRJEB10320 15022 235 2.135 5.01725 Metazoa 33208 Nematoda Nematoda 73.2 4.13e-14   NR CDQ08293.1 6279 g14764 i0 78.2 1.9531914893617 78 17 99.6 0 2 235 4 81 CDQ08293.1 Bm12633, partial [Brugia malayi] diamond 459 73.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Brugia Brugia malayi
1287790 1287790 PRJEB10320_P_NODE_19062_length_199_cov_1.475610_g18804_i0 PRJEB10320 19062 199 1.47561 2.9364639 Strongyloides ratti 34506 Nematoda Nematoda 139 1.29e-28   NTclustered gi|1376144539|ref|XM_024652732.1| 34506 g18804 i0 83.007 1.14070351758794 153 26 77 0 47 199 73 225 Strongyloides ratti 40S ribosomal protein S14 (SRAE_2000174400), partial mRNA blastn 227 139 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
1287803 1287803 PRJEB10320_P_NODE_22442_length_177_cov_1.570423_g22184_i0 PRJEB10320 22442 177 1.570423 2.77964871 Oigolaimella attenuata 669116 Nematoda Nematoda 56.5 0.001   NTclustered gi|256709247|gb|GQ422276.1| 669116 g22184 i0 100 0.169491525423729 30 0 17 0 1 30 71 42 Oigolaimella attenuata small subunit ribosomal protein 14 (rps-14) mRNA, partial cds blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Diplogasteridae Oigolaimella Oigolaimella attenuata
1287839 1287839 PRJEB10320_P_NODE_3942_length_539_cov_2.922619_g3711_i0 PRJEB10320 3942 539 2.922619 15.75291641 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 293 1.18e-98   NR KAI6227855.1 269767 g3711 i0 78.9 4.75324675324675 171 36 95.2 0 522 10 20 190 KAI6227855.1 Peptidyl-prolyl cis-trans isomerase [Aphelenchoides besseyi] diamond 2562 293 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides besseyi
3839772 3839772 PRJEB10320_P_NODE_9284_length_325_cov_1.655172_g9026_i0 PRJEB10320 9284 325 1.655172 5.379309 Fictor stercorarius 1538713 Nematoda Nematoda 156 2.26e-33   NTclustered gi|675118821|gb|KJ877290.1| 1538713 g9026 i0 84.713 17.4184615384615 157 22 48 2 2 157 580 735 Fictor stercorarius strain RS9003 large subunit ribosomal protein 2 (rpl-2) mRNA, partial cds blastn 5661 156 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Fictor Fictor stercorarius
7665764 7665764 PRJEB10320_P_NODE_19747_length_194_cov_2.522013_g19489_i0 PRJEB10320 19747 194 2.522013 4.89270522 Pristionchus pacificus 54126 Nematoda Nematoda 106 2.78e-25   NR KAF8387263.1 54126 g19489 i0 76.6 0.989690721649485 64 15 99 0 193 2 269 332 KAF8387263.1 rpl-3 [Pristionchus pacificus] diamond 192 106 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
7665786 7665786 PRJEB10320_P_NODE_2427_length_688_cov_2.712098_g2235_i0 PRJEB10320 2427 688 2.712098 18.65923424 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 310 1.8399999999999998e-104   NR XP_003139952.1 7209 g2235 i0 70.5 35.2630813953488 207 61 90.3 0 21 641 1 207 XP_003139952.1 50S ribosomal protein L16 [Loa loa] diamond 24261 312 0.993589743589744 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Loa Loa loa
11491519 11491519 PRJEB10320_P_NODE_20230_length_191_cov_1.538462_g19972_i0 PRJEB10320 20230 191 1.538462 2.93846242 Caenorhabditis briggsae 6238 Nematoda Nematoda 159 9.409999999999999e-35   NTclustered gi|268534941|ref|XM_002632558.1| 6238 g19972 i0 81.771 1.00523560209424 192 33 100 2 1 191 1150 1340 Caenorhabditis briggsae Protein CBG21508 (CBG21508), partial mRNA blastn 192 159 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
12767096 12767096 PRJEB10320_P_NODE_26451_length_158_cov_0.975610_g26193_i0 PRJEB10320 26451 158 0.97561 1.5414638 Caenorhabditis briggsae 6238 Nematoda Nematoda 95.3 2.14e-15   NTclustered gi|268559571|ref|XM_002637731.1| 6238 g26193 i0 87.654 0.784810126582278 81 10 51 0 10 90 1522 1602 Caenorhabditis briggsae Protein CBR-DAF-21 (Cbr-daf-21), partial mRNA blastn 124 95.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
18834239 18834239 PRJEB10320_P_NODE_13955_length_248_cov_1.652582_g13697_i0 PRJEB10320 13955 248 1.652582 4.09840336 Pristionchus 54125 Nematoda Nematoda 202 2.0999999999999998e-47   NTclustered gi|150982243|gb|EF634710.1| 358043 g13697 i0 83.486 45.9032258064516 218 35 88 1 10 227 87 303 Pristionchus sp. 6 RS5101 large subunit ribosomal protein 30 (rpl-30) mRNA, partial cds blastn 11384 202 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus sp. 6 RS5101
20414196 20414196 PRJEB10320_P_NODE_8137_length_354_cov_1.686520_g7879_i0 PRJEB10320 8137 354 1.68652 5.9702808 Koerneria sp. RS1982 358044 Nematoda Nematoda 173 4.21e-53   NR ABR87277.1 358044 g7879 i0 67.5 1.93220338983051 114 37 96.6 0 352 11 26 139 ABR87277.1 large subunit ribosomal protein 27a, partial [Koerneria sp. RS1982] diamond 684 173 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Koerneria Koerneria sp. RS1982
21384601 21384601 PRJEB10320_P_NODE_23137_length_173_cov_1.739130_g22879_i0 PRJEB10320 23137 173 1.73913 3.0086949 Metazoa 33208 Nematoda Nematoda 320 3.61e-83   NTclustered gi|2646098909|gb|PP099678.1| 49354 g22879 i0 100 99.8150289017341 173 0 100 0 1 173 821 649 Plectus sp. isolate Nem.501 small subunit ribosomal RNA gene, partial sequence blastn 17268 320 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Plectida Plectidae Plectus Plectus sp.
27253856 27253856 PRJEB10320_P_NODE_21823_length_181_cov_1.369863_g21565_i0 PRJEB10320 21823 181 1.369863 2.47945203 Strongyloides ratti 34506 Nematoda Nematoda 46.6 7.3e-4   NR XP_024510759.1 34506 g21565 i0 43.6 1.8232044198895 55 30 91.2 1 178 14 527 580 XP_024510759.1 Slit homolog 2 protein [Strongyloides ratti] diamond 330 46.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
27728123 27728123 PRJEB10320_P_NODE_27304_length_154_cov_2.016807_g27046_i0 PRJEB10320 27304 154 2.016807 3.10588278 Ditylenchus destructor 166010 Nematoda Nematoda 53.9 3.8e-7   NR KAI1721027.1 166010 g27046 i0 61.1 1.4025974025974 36 14 70.1 0 112 5 106 141 KAI1721027.1 hypothetical protein Ddc_07462 [Ditylenchus destructor] diamond 216 53.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
27942743 27942743 PRJEB10320_P_NODE_5525_length_450_cov_1.662651_g5275_i0 PRJEB10320 5525 450 1.662651 7.4819295 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 78.6 1.15e-13   NR KAK5983209.1 6319 g5275 i0 31.5 6.15333333333333 130 83 83.3 2 52 426 691 819 KAK5983209.1 High density lipoprotein binding protein a [Trichostrongylus colubriformis] diamond 2769 79.3 0.991172761664565 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Trichostrongylus Trichostrongylus colubriformis
30190630 30190630 PRJEB10320_P_NODE_6752_length_398_cov_1.763085_g6497_i0 PRJEB10320 6752 398 1.763085 7.0170783 Trichinella pseudospiralis 6337 Nematoda Nematoda 44.3 0.0361   NR KRY67124.1 6337 g6497 i0 27.1 1.41708542713568 96 70 72.4 0 13 300 78 173 KRY67124.1 Histone H2A.Z [Trichinella pseudospiralis] diamond 564 44.3 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
30317650 30317650 PRJEB10320_P_NODE_25852_length_160_cov_1.280000_g25594_i0 PRJEB10320 25852 160 1.28 2.048 Toxocara canis 6265 Nematoda Nematoda 89.4 4.11e-19   NR VDM45449.1 6265 g25594 i0 83 3.825 53 9 99.4 0 2 160 219 271 VDM45449.1 unnamed protein product [Toxocara canis] diamond 612 89.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
30696153 30696153 PRJEB10320_P_NODE_24674_length_165_cov_2.461538_g24416_i0 PRJEB10320 24674 165 2.461538 4.0615377 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 42.4 0.0182   NR CAD5212124.1 6326 g24416 i0 51.3 2.34545454545455 39 19 70.9 0 22 138 37 75 CAD5212124.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 387 42.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
30721616 30721616 PRJEB10320_P_NODE_10814_length_295_cov_1.307692_g10556_i0 PRJEB10320 10814 295 1.307692 3.8576914 Rhabditida 6236 Nematoda Nematoda 68.9 3.38e-11   NR KAJ1364387.1 148309 g10556 i0 80 5.00338983050847 35 7 35.6 0 2 106 308 342 KAJ1364387.1 hypothetical protein KIN20_024476 [Parelaphostrongylus tenuis] diamond 1476 69.3 0.994227994227994 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Parelaphostrongylus Parelaphostrongylus tenuis
30816507 30816507 PRJEB10320_P_NODE_19954_length_193_cov_1.518987_g19696_i0 PRJEB10320 19954 193 1.518987 2.93164491 Metazoa 33208 Nematoda Nematoda 50.8 2.34e-5   NR VDM81154.1 40348 g19696 i0 49.1 4.46113989637306 55 26 83.9 2 186 25 85 138 VDM81154.1 unnamed protein product [Strongylus vulgaris] diamond 861 51.2 0.9921875 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Strongylus Strongylus vulgaris
30854165 30854165 PRJEB10320_P_NODE_26714_length_157_cov_0.975410_g26456_i0 PRJEB10320 26714 157 0.97541 1.5313937 Mesorhabditis belari 2138241 Nematoda Nematoda 70.9 1.4e-12   NR CAJ0949263.1 2138241 g26456 i0 78 3.57324840764331 41 9 78.3 0 35 157 50 90 CAJ0949263.1 unnamed protein product, partial [Mesorhabditis belari] diamond 561 70.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
30917580 30917580 PRJEB10320_P_NODE_5934_length_430_cov_2.440506_g5683_i0 PRJEB10320 5934 430 2.440506 10.4941758 Steinernema carpocapsae 34508 Nematoda Nematoda 71.6 4.48e-12   NR TKR89800.1 34508 g5683 i0 35.4 2.76976744186046 96 61 67 1 394 107 123 217 TKR89800.1 hypothetical protein L596_013847 [Steinernema carpocapsae] diamond 1191 71.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
31169930 31169930 PRJEB10320_P_NODE_19195_length_198_cov_1.717791_g18937_i0 PRJEB10320 19195 198 1.717791 3.40122618 Thelazia callipaeda 103827 Nematoda Nematoda 48.5 4.87e-5   NR VDN03111.1 103827 g18937 i0 34.4 3.74242424242424 64 42 97 0 195 4 17 80 VDN03111.1 unnamed protein product [Thelazia callipaeda] diamond 741 48.9 0.991820040899796 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Thelaziidae Thelazia Thelazia callipaeda
31233188 31233188 PRJEB10320_P_NODE_19655_length_195_cov_1.562500_g19397_i0 PRJEB10320 19655 195 1.5625 3.046875 Mesorhabditis belari 2138241 Nematoda Nematoda 79.7 3.76e-16   NR CAJ0938006.1 2138241 g19397 i0 61.3 4.93846153846154 62 24 95.4 0 1 186 86 147 CAJ0938006.1 unnamed protein product, partial [Mesorhabditis belari] diamond 963 79.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
31391698 31391698 PRJEB10320_P_NODE_12896_length_262_cov_1.079295_g12638_i0 PRJEB10320 12896 262 1.079295 2.8277529 Dirofilaria immitis 6287 Nematoda Nematoda 60.5 2.65e-8   NR MCP9258340.1 6287 g12638 i0 42.4 1.6030534351145 66 38 75.6 0 35 232 352 417 MCP9258340.1 Acyl-CoA-binding domain-containing protein 6 [Dirofilaria immitis] diamond 420 60.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
31512171 31512171 PRJEB10320_P_NODE_28076_length_152_cov_1.025641_g27818_i0 PRJEB10320 28076 152 1.025641 1.55897432 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 76.6 5.21e-17   NR KAE9411659.1 6313 g27818 i0 76 3.94736842105263 50 12 98.7 0 150 1 6 55 KAE9411659.1 hypothetical protein Angca_003870, partial [Angiostrongylus cantonensis] diamond 600 76.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
31543673 31543673 PRJEB10320_P_NODE_28396_length_151_cov_1.034483_g28138_i0 PRJEB10320 28396 151 1.034483 1.56206933 root 1 Root_unresolved Root_unresolved 45.8 8.03e-4   NR KAL3120756.1 157864 g28138 i0 51.1 2.76158940397351 47 23 93.4 0 149 9 13 59 KAL3120756.1 hypothetical protein niasHT_008048 [Heterodera trifolii] diamond 417 45.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
31581476 31581476 PRJEB10320_P_NODE_13196_length_258_cov_1.614350_g12938_i0 PRJEB10320 13196 258 1.61435 4.165023 Meloidogyne graminicola 189291 Nematoda Nematoda 73.2 3.99e-13   NR AVZ46778.1 189291 g12938 i0 50.6 0.988372093023256 85 42 98.8 0 256 2 135 219 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 255 73.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
32087490 32087490 PRJEB10320_P_NODE_4458_length_506_cov_3.477707_g4221_i0 PRJEB10320 4458 506 3.477707 17.59719742 Steinernema hermaphroditum 289476 Nematoda Nematoda 83.6 3.76e-15   NR KAK0401820.1 289476 g4221 i0 37.4 1.54743083003953 131 77 75.3 2 1 381 962 1091 KAK0401820.1 hypothetical protein QR680_015990 [Steinernema hermaphroditum] diamond 783 83.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema hermaphroditum
32403985 32403985 PRJEB10320_P_NODE_18679_length_202_cov_1.437126_g18421_i0 PRJEB10320 18679 202 1.437126 2.90299452 Pristionchus mayeri 1317129 Nematoda Nematoda 74.3 2.71e-14   NR GMR45967.1 1317129 g18421 i0 52.5 0.905940594059406 61 29 90.6 0 17 199 1 61 GMR45967.1 hypothetical protein PMAYCL1PPCAC_16162, partial [Pristionchus mayeri] diamond 183 74.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus mayeri
32499041 32499041 PRJEB10320_P_NODE_24819_length_165_cov_1.230769_g24561_i0 PRJEB10320 24819 165 1.230769 2.03076885 Caenorhabditis nigoni 1611254 Nematoda Nematoda 58.9 1.44e-9   NR PIC55560.1 1611254 g24561 i0 87.1 1.10909090909091 31 4 56.4 0 1 93 65 95 PIC55560.1 hypothetical protein B9Z55_000780 [Caenorhabditis nigoni] diamond 183 58.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis nigoni
32713407 32713407 PRJEB10320_P_NODE_19220_length_198_cov_1.472393_g18962_i0 PRJEB10320 19220 198 1.472393 2.91533814 Nematoda 6231 Nematoda Nematoda 95.5 2.73e-21   NR KAK5986411.1 6319 g18962 i0 73.8 21.1666666666667 61 16 92.4 0 185 3 165 225 KAK5986411.1 V-type proton ATPase subunit [Trichostrongylus colubriformis] diamond 4191 95.9 0.995828988529718 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Trichostrongylus Trichostrongylus colubriformis
32745048 32745048 PRJEB10320_P_NODE_21180_length_185_cov_1.066667_g20922_i0 PRJEB10320 21180 185 1.066667 1.97333395 Metazoa 33208 Nematoda Nematoda 48.1 2.17e-4   NR CDJ87075.1 6289 g20922 i0 53.8 4.47567567567568 39 16 63.2 1 12 128 177 213 CDJ87075.1 CUB and EGF and Kelch repeat type 2 and Kelch repeat type 1 and Plexin domain containing protein [Haemonchus contortus] diamond 828 48.5 0.991752577319588 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;