RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB10320", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB10320 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10216270 10216270 PRJEB10320_P_NODE_1329_length_900_cov_8.536416_g1183_i0 PRJEB10320 1329 900 8.536416 76.827744 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 129 9.459999999999999e-32   NR TEB19254.1 2494336 g1183 i0 33.7 0.89 267 155 83 8 46 792 1 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 801 129 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
17865323 17865323 PRJEB10320_P_NODE_2575_length_668_cov_8.031596_g2374_i0 PRJEB10320 2575 668 8.031596 53.65106128 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 274 2.03e-90   NR XP_002778466.1 423536 g2374 i0 70 0.853293413173653 190 56 84.9 1 606 40 1 190 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 570 274 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
27064302 27064302 PRJEB10320_P_NODE_26462_length_158_cov_0.951220_g26204_i0 PRJEB10320 26462 158 0.95122 1.5029276 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 47 3.47e-4   NR XP_002784384.1 423536 g26204 i0 51.2 0.816455696202532 43 20 81.6 1 6 134 182 223 XP_002784384.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983] diamond 129 47 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
31612963 31612963 PRJEB10320_P_NODE_936_length_1044_cov_7.798811_g813_i0 PRJEB10320 936 1044 7.798811 81.41958684 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 174 1.1599999999999998e-48   NR TEB19254.1 2494336 g813 i0 42.4 0.758620689655172 264 140 73.3 4 980 216 3 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 792 174 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;