RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

16 rows where bioproject = "PRJEB10320", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 16 ✖

tax_clade 1

  • Sar · 16 ✖

bioproject 1

  • PRJEB10320 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13550 13550 PRJEB10320_P_NODE_28261_length_151_cov_1.448276_g28003_i0 PRJEB10320 28261 151 1.448276 2.18689676 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 148 1.5299999999999999e-31   NTclustered gi|1027960071|ref|XM_735127.2| 31271 g28003 i0 86.131 70.9801324503311 137 19 91 0 3 139 1112 976 Plasmodium chabaudi chabaudi actin I, putative (PCHAS_1461600), partial mRNA blastn 10718 148 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
13551 13551 PRJEB10320_P_NODE_28541_length_150_cov_1.600000_g28283_i0 PRJEB10320 28541 150 1.6 2.4 Plasmodium reichenowi 5854 SAR_Eukaryotes SAR_Eukaryotes 60.2 7.3e-5   NTclustered gi|1145257018|ref|XM_012906115.2| 5854 g28283 i0 94.737 0.446666666666667 38 2 25 0 13 50 5677 5714 Plasmodium reichenowi trafficking protein particle complex subunit 8, putative partial mRNA blastn 67 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
982431 982431 PRJEB10320_P_NODE_23921_length_169_cov_1.305970_g23663_i0 PRJEB10320 23921 169 1.30597 2.2070893 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 62.1 2.34e-5   NTclustered gi|916501459|ref|XM_013496090.1| 44415 g23663 i0 100 5.80473372781065 33 0 20 0 120 152 146 178 Eimeria mitis uncharacterized protein (EMH_0045670), partial mRNA blastn 981 62.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
1287775 1287775 PRJEB10320_P_NODE_14522_length_241_cov_1.553398_g14264_i0 PRJEB10320 14522 241 1.553398 3.74368918 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|401407051|ref|XM_003882926.1| 572307 g14264 i0 96.97 10.8755186721992 33 1 14 0 135 167 428 396 Neospora caninum Liverpool conserved hypothetical protein (NCLIV_027320), partial mRNA blastn 2621 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
3839755 3839755 PRJEB10320_P_NODE_5384_length_455_cov_9.404762_g5135_i0 PRJEB10320 5384 455 9.404762 42.7916671 Plasmodium cynomolgi 5827 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.003   NTclustered gi|457871854|ref|XM_004222799.1| 1120755 g5135 i0 90.476 0.232967032967033 42 4 9 0 375 416 699 658 Plasmodium cynomolgi strain B transcription factor with AP2 domain(s) (PCYB_102500) mRNA, complete cds blastn 106 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium cynomolgi
7665767 7665767 PRJEB10320_P_NODE_20107_length_192_cov_1.496815_g19849_i0 PRJEB10320 20107 192 1.496815 2.8738848 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 90.1 2.66e-19   NR SBS81362.1 5858 g19849 i0 73.8 8.640625 61 15 95.3 1 5 187 134 193 SBS81362.1 heat shock protein 90, putative (HSP90), partial [Plasmodium malariae] diamond 1659 90.5 0.995580110497237 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
9910643 9910643 PRJEB10320_P_NODE_8868_length_335_cov_2.170000_g8610_i0 PRJEB10320 8868 335 2.17 7.2695 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 153 3.8e-45   NR EUD71171.1 138298 g8610 i0 66.7 9.45671641791045 105 35 94 0 21 335 7 111 EUD71171.1 eukaryotic translation initiation factor 5A-2 [Plasmodium vinckei petteri] diamond 3168 153 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
10216298 10216298 PRJEB10320_P_NODE_20369_length_190_cov_1.548387_g20111_i0 PRJEB10320 20369 190 1.548387 2.9419353 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 62.1 2.71e-5   NTclustered gi|1085116469|ref|XM_018779636.1| 508771 g20111 i0 90 9.51578947368421 50 2 25 3 107 153 5910 5861 Toxoplasma gondii ME49 Dopey, N-terminal domain-containing protein mRNA blastn 1808 62.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
20414173 20414173 PRJEB10320_P_NODE_27077_length_155_cov_1.666667_g26819_i0 PRJEB10320 27077 155 1.666667 2.58333385 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 60.2 7.62e-5   NTclustered gi|1620114166|ref|XM_028670251.1| 5849 g26819 i0 97.222 2.66451612903226 36 0 23 1 68 103 3155 3121 Plasmodium gallinaceum conserved protein, unknown function (PGAL8A_00390500), partial mRNA blastn 413 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
21690172 21690172 PRJEB10320_P_NODE_24818_length_165_cov_1.230769_g24560_i0 PRJEB10320 24818 165 1.230769 2.03076885 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 121 3.73e-23   NTclustered gi|1270522599|ref|XM_721458.2| 5861 g24560 i0 91.011 19.2242424242424 89 8 54 0 75 163 1712 1624 Plasmodium yoelii uncharacterized protein (PY17X_1242900), partial mRNA blastn 3172 121 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
26994729 26994729 PRJEB10320_P_NODE_8182_length_353_cov_1.575472_g7924_i0 PRJEB10320 8182 353 1.575472 5.56141616 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.4 7.3e-6   NR XP_953348.1 5874 g7924 i0 38.9 2.99150141643059 72 40 61.2 2 14 229 9 76 XP_953348.1 60S ribosomal protein P1, putative [Theileria annulata] diamond 1056 52.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
30222233 30222233 PRJEB10320_P_NODE_17912_length_208_cov_1.485549_g17654_i0 PRJEB10320 17912 208 1.485549 3.08994192 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 67.4 2.32e-11   NR OEH77243.1 88456 g17654 i0 53.6 3.98076923076923 69 31 99.5 1 207 1 99 166 OEH77243.1 DNA-directed RNA polymerase II rpb5 [Cyclospora cayetanensis] diamond 828 67.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
30311497 30311497 PRJEB10320_P_NODE_17632_length_211_cov_0.943182_g17374_i0 PRJEB10320 17632 211 0.943182 1.99011402 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 116 2.9e-28   NR AAZ06362.1 5811 g17374 i0 72.5 26.7867298578199 69 19 98.1 0 210 4 22 90 AAZ06362.1 ATP-binding cassette sub-family E member 1 [Toxoplasma gondii] diamond 5652 116 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
30349250 30349250 PRJEB10320_P_NODE_21172_length_185_cov_1.140000_g20914_i0 PRJEB10320 21172 185 1.14 2.109 Cryptosporidium andersoni 117008 SAR_Eukaryotes SAR_Eukaryotes 58.9 1.34e-8   NR XP_067069864.1 117008 g20914 i0 54.4 2.77297297297297 57 26 92.4 0 185 15 26 82 XP_067069864.1 60s ribosomal protein L13A [Cryptosporidium andersoni] diamond 513 58.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium andersoni
32150817 32150817 PRJEB10320_P_NODE_18818_length_201_cov_1.445783_g18560_i0 PRJEB10320 18818 201 1.445783 2.90602383 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 58.5 2.97e-8   NR UKK02333.1 68886 g18560 i0 61.5 0.582089552238806 39 15 58.2 0 1 117 168 206 UKK02333.1 60S ribosomal protein L10 [Theileria orientalis] diamond 117 58.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
32246006 32246006 PRJEB10320_P_NODE_26318_length_158_cov_1.609756_g26060_i0 PRJEB10320 26318 158 1.609756 2.54341448 Cryptosporidium parvum Iowa II 353152 SAR_Eukaryotes SAR_Eukaryotes 72 3.63e-14   NR XP_626159.1 353152 g26060 i0 66 8.44936708860759 50 17 94.9 0 158 9 100 149 XP_626159.1 40S ribosomal protein S13, partial [Cryptosporidium parvum Iowa II] diamond 1335 72 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;