RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB10320", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_kingdom = "Pseudomonadati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pseudomonadati · 1 ✖

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 1 ✖

bioproject 1

  • PRJEB10320 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26811237 26811237 PRJEB10320_P_NODE_17001_length_216_cov_1.314917_g16743_i0 PRJEB10320 17001 216 1.314917 2.84022072 Nitrospinaceae bacterium 2358456 Bacteria Bacteria 66.2 1.09e-10   NR GJL78915.1 2358456 g16743 i0 56.9 2.94444444444444 51 22 70.8 0 15 167 284 334 GJL78915.1 MAG: aldehyde reductase Ahr [Nitrospinaceae bacterium] diamond 636 66.2 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae   Nitrospinaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;