RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB10320", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJEB10320 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2563416 2563416 PRJEB10320_P_NODE_22943_length_174_cov_1.971223_g22685_i0 PRJEB10320 22943 174 1.971223 3.42992802 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 294 2.1999999999999998e-75   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g22685 i0 97.126 17.9195402298851 174 5 100 0 1 174 890776 890603 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 3118 294 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
21690157 21690157 PRJEB10320_P_NODE_20358_length_190_cov_1.709677_g20100_i0 PRJEB10320 20358 190 1.709677 3.2483863 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 213 7.08e-51   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g20100 i0 86.842 62.8526315789474 190 25 100 0 1 190 890000 890189 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 11942 213 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
31353848 31353848 PRJEB10320_P_NODE_2896_length_629_cov_3.968013_g2687_i0 PRJEB10320 2896 629 3.968013 24.95880177 Bacteria 2 Bacteria Bacteria 114 4.31e-28   NR MCT4592035.1 2044595 g2687 i0 39.5 1.38314785373609 147 86 69.6 2 543 106 4 148 MCT4592035.1 NAD(P)H-dependent oxidoreductase [Candidatus Altimarinota bacterium] diamond 870 114 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;