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contig_metadata

16 rows where bioproject = "PRJEB10320" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 16 ✖

bioproject 1

  • PRJEB10320 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13492 13492 PRJEB10320_P_NODE_11441_length_284_cov_1.377510_g11183_i0 PRJEB10320 11441 284 1.37751 3.9121284 Patescibacteria group bacterium 2052139 Bacteria Bacteria 396 1.05e-105   NTclustered gi|2621785934|emb|OY782392.1| 2052139 g11183 i0 91.873 119.401408450704 283 23 99 0 2 284 427950 427668 MAG: Patescibacteria group bacterium isolate 573f42cd-6ce4-4b95-a45b-0ed028197a55 genome assembly, chromosome: 1 blastn 33910 396 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
2563416 2563416 PRJEB10320_P_NODE_22943_length_174_cov_1.971223_g22685_i0 PRJEB10320 22943 174 1.971223 3.42992802 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 294 2.1999999999999998e-75   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g22685 i0 97.126 17.9195402298851 174 5 100 0 1 174 890776 890603 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 3118 294 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
21690157 21690157 PRJEB10320_P_NODE_20358_length_190_cov_1.709677_g20100_i0 PRJEB10320 20358 190 1.709677 3.2483863 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 213 7.08e-51   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g20100 i0 86.842 62.8526315789474 190 25 100 0 1 190 890000 890189 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 11942 213 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
26969348 26969348 PRJEB10320_P_NODE_1402_length_883_cov_2.783019_g1253_i0 PRJEB10320 1402 883 2.783019 24.57405777 Candidatus Babeliaceae bacterium 2545253 Bacteria Bacteria 85.9 1.26e-14   NR HVX00123.1 2545253 g1253 i0 45.7 0.319365798414496 94 46 30.9 3 4 276 611 702 HVX00123.1 RNase H-like domain-containing protein [Candidatus Babeliaceae bacterium] diamond 282 85.9 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Babeliaceae   Candidatus Babeliaceae bacterium
28485551 28485551 PRJEB10320_P_NODE_14587_length_240_cov_1.912195_g14329_i0 PRJEB10320 14587 240 1.912195 4.589268 Minisyncoccota bacterium 2053589 Bacteria Bacteria 85.1 4.36e-17   NR MEZ0208637.1 2053589 g14329 i0 59.2 1.8875 76 31 95 0 8 235 1285 1360 MEZ0208637.1 RNase H-like domain-containing protein [Candidatus Paceibacterota bacterium] diamond 453 85.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28580330 28580330 PRJEB10320_P_NODE_21807_length_181_cov_1.417808_g21549_i0 PRJEB10320 21807 181 1.417808 2.56623248 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 68.2 1.69e-11   NR MEX0940507.1 2803731 g21549 i0 59.6 0.94475138121547 57 22 94.5 1 10 180 67 122 MEX0940507.1 histone deacetylase [Candidatus Babeliales bacterium] diamond 171 68.2 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
28927539 28927539 PRJEB10320_P_NODE_27588_length_153_cov_2.033898_g27330_i0 PRJEB10320 27588 153 2.033898 3.11186394 Candidatus Babeliaceae bacterium 2545253 Bacteria Bacteria 60.5 5.92e-9   NR HVX00491.1 2545253 g27330 i0 61.9 1.64705882352941 42 16 82.4 0 17 142 19 60 HVX00491.1 RNase H-like domain-containing protein [Candidatus Babeliaceae bacterium] diamond 252 60.5 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Babeliaceae   Candidatus Babeliaceae bacterium
28953282 28953282 PRJEB10320_P_NODE_15508_length_230_cov_1.523077_g15250_i0 PRJEB10320 15508 230 1.523077 3.5030771 Bacillati 1783272 Bacteria Bacteria 41.6 0.0367   NR KKR90616.1 1618593 g15250 i0 55.6 1.47391304347826 36 16 47 0 34 141 9 44 KKR90616.1 MAG: 50S ribosomal protein L7/L12 [Candidatus Woesebacteria bacterium GW2011_GWD1_41_12] diamond 339 41.6 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium GW2011_GWD1_41_12
29527525 29527525 PRJEB10320_P_NODE_18930_length_200_cov_1.454545_g18672_i0 PRJEB10320 18930 200 1.454545 2.90909 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 41.6 0.0402   NR NLD25205.1 2099670 g18672 i0 50 0.54 36 18 54 0 3 110 30 65 NLD25205.1 DUF4116 domain-containing protein [Candidatus Dojkabacteria bacterium] diamond 108 41.6 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
29906520 29906520 PRJEB10320_P_NODE_13131_length_259_cov_1.116071_g12873_i0 PRJEB10320 13131 259 1.116071 2.89062389 Patescibacteria group bacterium 2052139 Bacteria Bacteria 58.9 9.24e-8   NR MCL4419262.1 2052139 g12873 i0 69.4 0.416988416988417 36 11 41.7 0 1 108 114 149 MCL4419262.1 hypothetical protein [Patescibacteria group bacterium] diamond 108 58.9 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29969517 29969517 PRJEB10320_P_NODE_6091_length_423_cov_3.340206_g5840_i0 PRJEB10320 6091 423 3.340206 14.12907138 Candidatus Babeliaceae bacterium 2545253 Bacteria Bacteria 155 7.19e-42   NR HVW99438.1 2545253 g5840 i0 51.8 1.97163120567376 139 67 98.6 0 421 5 196 334 HVW99438.1 DDE-type integrase/transposase/recombinase [Candidatus Babeliaceae bacterium] diamond 834 155 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Babeliaceae   Candidatus Babeliaceae bacterium
29995209 29995209 PRJEB10320_P_NODE_9451_length_321_cov_2.255245_g9193_i0 PRJEB10320 9451 321 2.255245 7.23933645 Bacteria 2 Bacteria Bacteria 60.1 2.88e-8   NR MEK7066353.1 2052139 g9193 i0 39.8 2.01869158878505 108 52 97.2 2 312 1 76 174 MEK7066353.1 sigma-70 family RNA polymerase sigma factor [Patescibacteria group bacterium] diamond 648 60.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31353848 31353848 PRJEB10320_P_NODE_2896_length_629_cov_3.968013_g2687_i0 PRJEB10320 2896 629 3.968013 24.95880177 Bacteria 2 Bacteria Bacteria 114 4.31e-28   NR MCT4592035.1 2044595 g2687 i0 39.5 1.38314785373609 147 86 69.6 2 543 106 4 148 MCT4592035.1 NAD(P)H-dependent oxidoreductase [Candidatus Altimarinota bacterium] diamond 870 114 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31360089 31360089 PRJEB10320_P_NODE_22696_length_176_cov_1.134752_g22438_i0 PRJEB10320 22696 176 1.134752 1.99716352 Candidatus Berkelbacteria bacterium RIFCSPHIGHO2_12_FULL_5 2053521 Bacteria Bacteria 65.1 3.78e-11   NR OGD62259.1 1797470 g22438 i0 58 0.852272727272727 50 21 85.2 0 22 171 122 171 OGD62259.1 MAG: 50S ribosomal protein L6 [Candidatus Berkelbacteria bacterium RIFCSPHIGHO2_12_FULL_50_11] diamond 150 65.1 1 Bacteria Bacteria candidate phyla   Candidatus Berkelbacteria         Candidatus Berkelbacteria bacterium RIFCSPHIGHO2_12_FULL_50_11
32119261 32119261 PRJEB10320_P_NODE_28138_length_152_cov_0.923077_g27880_i0 PRJEB10320 28138 152 0.923077 1.40307704 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 45.4 0.0012   NR MCX6714917.1 2053634 g27880 i0 63 2.05263157894737 27 10 53.3 0 7 87 483 509 MCX6714917.1 hypothetical protein [Candidatus Uhrbacteria bacterium] diamond 312 45.4 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium
32751064 32751064 PRJEB10320_P_NODE_13280_length_257_cov_1.788288_g13022_i0 PRJEB10320 13280 257 1.788288 4.59590016 Candidatus Binatus sp. 2811406 Bacteria Bacteria 50.8 4.2e-5   NR HSV07951.1 2811406 g13022 i0 54.1 0.431906614785992 37 17 43.2 0 255 145 84 120 HSV07951.1 hypothetical protein [Candidatus Binatus sp.] diamond 111 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae Candidatus Binatus Candidatus Binatus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;