RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJEB10140" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 9 ✖

tax_clade 1

bioproject 1

  • PRJEB10140 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16589998 16589998 PRJEB10140_P_NODE_39134_length_908_cov_5.830035_g25130_i0 PRJEB10140 39134 908 5.830035 52.9367178 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 192 5.6e-57   NR ESU43996.1 5741 g25130 i0 55.1 8.75881057268722 176 77 58.1 1 861 334 15 188 ESU43996.1 Peptidyl-prolyl cis-trans isomerase [Giardia intestinalis] diamond 7953 193 0.994818652849741 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
21688265 21688265 PRJEB10140_P_NODE_142918_length_258_cov_1.732057_g125610_i0 PRJEB10140 142918 258 1.732057 4.46870706 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 136 5.99e-35   NR GIQ85281.1 797122 g125610 i0 68.2 1.95348837209302 85 27 98.8 0 3 257 1047 1131 GIQ85281.1 phosphatidylinositol Kinase, partial [Kipferlia bialata] diamond 504 137 0.992700729927007 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
27948578 27948578 PRJEB10140_P_NODE_102245_length_358_cov_1.326861_g84947_i0 PRJEB10140 102245 358 1.326861 4.75016238 Hexamita inflata 28002 Fornicata other_Eukaryota 65.5 9.77e-10   NR CAK8820454.1 28002 g84947 i0 44.7 0.787709497206704 94 45 74.6 4 270 4 59 150 CAK8820454.1 HINF_052845 [Hexamita inflata] diamond 282 65.5 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
28763451 28763451 PRJEB10140_P_NODE_223647_length_180_cov_2.335878_g206338_i0 PRJEB10140 223647 180 2.335878 4.2045804 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 43.9 0.00601   NR XP_067766909.1 348837 g206338 i0 38.6 2.78333333333333 57 33 95 1 8 178 44 98 XP_067766909.1 Cysteine-rich membrane protein 1 [Spironucleus salmonicida] diamond 501 43.9 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
29085517 29085517 PRJEB10140_P_NODE_71168_length_516_cov_2.805139_g54038_i0 PRJEB10140 71168 516 2.805139 14.47451724 Giardia intestinalis 5741 Fornicata other_Eukaryota 52.8 1.56e-4   NR ESU44488.1 5741 g54038 i0 31.4 1.09302325581395 188 92 90.7 7 20 487 185 367 ESU44488.1 Variant-specific surface protein [Giardia intestinalis] diamond 564 52.8 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
29748145 29748145 PRJEB10140_P_NODE_59131_length_620_cov_2.094571_g42490_i0 PRJEB10140 59131 620 2.094571 12.9863402 Giardia intestinalis 5741 Fornicata other_Eukaryota 68.6 1.16e-9   NR XP_037902139.1 5741 g42490 i0 37.2 0.624193548387097 129 61 60 5 9 380 172 285 XP_037902139.1 High cysteine protein [Giardia intestinalis] diamond 387 68.6 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
31264892 31264892 PRJEB10140_P_NODE_181275_length_211_cov_1.814815_g163966_i0 PRJEB10140 181275 211 1.814815 3.82925965 Giardia lamblia P15 658858 Fornicata other_Eukaryota 50.8 3.41e-5   NR EFO60902.1 658858 g163966 i0 40.6 0.909952606635071 64 31 91 2 5 196 159 215 EFO60902.1 VSP [Giardia lamblia P15] diamond 192 50.8 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
31675977 31675977 PRJEB10140_P_NODE_213497_length_186_cov_2.540146_g196188_i0 PRJEB10140 213497 186 2.540146 4.72467156 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 42.7 0.0174   NR XP_067766886.1 348837 g196188 i0 35.1 0.919354838709677 57 35 91.9 1 175 5 345 399 XP_067766886.1 Cysteine-rich membrane protein 2 [Spironucleus salmonicida] diamond 171 42.7 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
31954666 31954666 PRJEB10140_P_NODE_196757_length_198_cov_1.040268_g179448_i0 PRJEB10140 196757 198 1.040268 2.05973064 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.8 2.87e-5   NR ESU35627.1 5741 g179448 i0 42.9 7.09090909090909 56 32 84.8 0 16 183 34 89 ESU35627.1 Actin related protein [Giardia intestinalis] diamond 1404 50.8 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;