RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB10140" and tax_phylum = "Cossaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB10140 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19138540 19138540 PRJEB10140_P_NODE_292496_length_162_cov_0.893805_g275187_i0 PRJEB10140 292496 162 0.893805 1.4479641 Bosavirus sp. 2340908 Viruses Viruses 300 4.36e-77   NTclustered gi|2277478567|gb|MZ502234.1| 2340908 g275187 i0 100 5.99382716049383 162 0 100 0 1 162 617 456 Bosavirus sp. isolate NCS1/USA nonstructural protein and structural protein genes, complete cds blastn 971 300 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Copiparvovirus Bosavirus sp.
28611744 28611744 PRJEB10140_P_NODE_251847_length_168_cov_0.873950_g234538_i0 PRJEB10140 251847 168 0.87395 1.468236 Psittacidae aveparvovirus 2794556 Viruses Viruses 81.3 3.45e-16   NR QTE03752.1 2794556 g234538 i0 61.8 0.982142857142857 55 21 98.2 0 166 2 305 359 QTE03752.1 MAG: hypothetical protein [Psittacidae aveparvovirus] diamond 165 81.3 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Aveparvovirus Psittacidae aveparvovirus
32087303 32087303 PRJEB10140_P_NODE_118258_length_309_cov_2.111538_g100952_i0 PRJEB10140 118258 309 2.111538 6.52465242 Psittacidae aveparvovirus 2794556 Viruses Viruses 64.7 1.46e-9   NR QKE54887.1 2794556 g100952 i0 37.4 1.92233009708738 99 55 94.2 3 300 10 70 163 QKE54887.1 MAG: replication protein [Parvoviridae sp.] diamond 594 64.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Psittacidae aveparvovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;