RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB10140" and tax_phylum = "Candidatus Poribacteria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB10140 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8938658 8938658 PRJEB10140_P_NODE_149768_length_247_cov_4.429293_g132460_i0 PRJEB10140 149768 247 4.429293 10.94035371 uncultured Poribacteria bacterium 265321 Bacteria Bacteria 52.8 0.022   NTclustered gi|2518596601|emb|OX639973.1| 265321 g132460 i0 100 0.11336032388664 28 0 11 0 73 100 5229843 5229816 MAG: uncultured Poribacteria bacterium isolate a51c2dcd-0bc8-4832-ac43-f95c9d639ad7 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         uncultured Poribacteria bacterium
27127010 27127010 PRJEB10140_P_NODE_244242_length_169_cov_1.683333_g226933_i0 PRJEB10140 244242 169 1.683333 2.84483277 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 43.5 0.00709   NR MBM3240966.1 2026781 g226933 i0 39.2 0.905325443786982 51 31 90.5 0 153 1 176 226 MBM3240966.1 LamG domain-containing protein [Candidatus Poribacteria bacterium] diamond 153 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32024230 32024230 PRJEB10140_P_NODE_58558_length_626_cov_3.762565_g41962_i0 PRJEB10140 58558 626 3.762565 23.5536569 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 55.8 1.78e-5   NR MDE0020518.1 2026781 g41962 i0 36.4 0.31629392971246 66 42 31.6 0 624 427 159 224 MDE0020518.1 LamG domain-containing protein [Candidatus Poribacteria bacterium] diamond 198 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;