RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB10140" and tax_phylum = "Candidatus Elulimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Elulimicrobiota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB10140 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15313584 15313584 PRJEB10140_P_NODE_100733_length_363_cov_2.955414_g83435_i0 PRJEB10140 100733 363 2.955414 10.72815282 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 187 7.94e-56   NR NBP58950.1 2802965 g83435 i0 76.3 0.975206611570248 118 28 97.5 0 356 3 65 182 NBP58950.1 glutamine--tRNA ligase [Candidatus Elulimicrobium humile] diamond 354 187 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
27759442 27759442 PRJEB10140_P_NODE_118364_length_309_cov_1.515385_g101058_i0 PRJEB10140 118364 309 1.515385 4.68253965 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 117 1.76e-30   NR NBP56373.1 2802965 g101058 i0 56.6 0.961165048543689 99 43 96.1 0 5 301 38 136 NBP56373.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 297 117 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
29779924 29779924 PRJEB10140_P_NODE_237091_length_173_cov_1.258065_g219782_i0 PRJEB10140 237091 173 1.258065 2.17645245 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 80.5 1.57e-16   NR NBP55252.1 2802965 g219782 i0 70.9 0.953757225433526 55 16 95.4 0 8 172 31 85 NBP55252.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 165 80.5 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;