RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB10140" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB10140 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28485360 28485360 PRJEB10140_P_NODE_114947_length_318_cov_1.159851_g97641_i0 PRJEB10140 114947 318 1.159851 3.68832618 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 115 2.14e-29   NR MCK9330629.1 2030808 g97641 i0 62.5 0.830188679245283 88 32 83 1 2 265 118 204 MCK9330629.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 264 115 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30569488 30569488 PRJEB10140_P_NODE_24133_length_1331_cov_17.932917_g14280_i0 PRJEB10140 24133 1331 17.932917 238.68712527 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 50.1 0.0257   NR MDD2331047.1 2030808 g14280 i0 22.2 0.669421487603306 297 181 58.8 11 353 1135 207 489 MDD2331047.1 tetratricopeptide repeat protein [Candidatus Cloacimonadota bacterium] diamond 891 50.1 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
31802396 31802396 PRJEB10140_P_NODE_159297_length_235_cov_1.177419_g141989_i0 PRJEB10140 159297 235 1.177419 2.76693465 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 44.3 0.00908   NR MCD4818725.1 2030808 g141989 i0 40.8 1.51914893617021 49 29 62.6 0 48 194 175 223 MCD4818725.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 357 44.3 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
32176487 32176487 PRJEB10140_P_NODE_228998_length_177_cov_2.367188_g211689_i0 PRJEB10140 228998 177 2.367188 4.18992276 root 1 Root_unresolved Root_unresolved 78.6 3.18e-15   NR MBN1327654.1 2030808 g211689 i0 57.9 8.61016949152542 57 24 96.6 0 2 172 100 156 MBN1327654.1 ATPase [Candidatus Cloacimonadota bacterium] diamond 1524 78.6 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
32593537 32593537 PRJEB10140_P_NODE_124820_length_293_cov_2.500000_g107513_i0 PRJEB10140 124820 293 2.5 7.325 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 44.7 0.0141   NR MDD2331759.1 2030808 g107513 i0 44.7 0.48122866894198 47 24 46.1 1 121 255 264 310 MDD2331759.1 elongation factor G [Candidatus Cloacimonadota bacterium] diamond 141 44.7 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
32782247 32782247 PRJEB10140_P_NODE_25000_length_1299_cov_17.688800_g14280_i1 PRJEB10140 25000 1299 17.6888 229.777512 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 50.1 0.0245   NR MDD2331047.1 2030808 g14280 i1 22.2 0.685912240184757 297 181 60.3 11 321 1103 207 489 MDD2331047.1 tetratricopeptide repeat protein [Candidatus Cloacimonadota bacterium] diamond 891 50.1 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;