RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJEB10140" and tax_kingdom = "Pararnavirae"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 8 ✖

bioproject 1

  • PRJEB10140 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14041218 14041218 PRJEB10140_P_NODE_42052_length_853_cov_8.063433_g27473_i0 PRJEB10140 42052 853 8.063433 68.78108349 Deltaretrovirus bovleu 3428211 Viruses Viruses 1565 0   NTclustered gi|924371543|gb|KT122858.1| 11901 g27473 i0 99.766 100 853 2 100 0 1 853 2019 2871 Bovine leukemia virus isolate YR2, complete genome blastn 85300 1565 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Deltaretrovirus Deltaretrovirus bovleu
26842863 26842863 PRJEB10140_P_NODE_152021_length_244_cov_2.133333_g134713_i0 PRJEB10140 152021 244 2.133333 5.20533252 Spiretrovirus marine7 3117324 Viruses Viruses 47.8 6.45e-4   NR DBA46637.1 3117324 g134713 i0 31.6 0.934426229508197 76 52 93.4 0 233 6 447 522 DBA46637.1 MAG TPA_asm: Gag-Pol [Spiretrovirus marine7064] diamond 228 47.8 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales     Spiretrovirus marine7064
27000772 27000772 PRJEB10140_P_NODE_230262_length_177_cov_1.171875_g212953_i0 PRJEB10140 230262 177 1.171875 2.07421875 Spiretrovirus marine7 3117324 Viruses Viruses 59.7 1.65e-8   NR DBA46637.1 3117324 g212953 i0 57.6 1 59 25 100 0 1 177 1344 1402 DBA46637.1 MAG TPA_asm: Gag-Pol [Spiretrovirus marine7064] diamond 177 59.7 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales     Spiretrovirus marine7064
27538257 27538257 PRJEB10140_P_NODE_201124_length_194_cov_1.972414_g183815_i0 PRJEB10140 201124 194 1.972414 3.82648316 Spiretrovirus marine7 3117324 Viruses Viruses 66.6 7.38e-11   NR DBA46637.1 3117324 g183815 i0 53.2 0.958762886597938 62 29 95.9 0 9 194 1367 1428 DBA46637.1 MAG TPA_asm: Gag-Pol [Spiretrovirus marine7064] diamond 186 66.6 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales     Spiretrovirus marine7064
27885493 27885493 PRJEB10140_P_NODE_254445_length_167_cov_1.796610_g237136_i0 PRJEB10140 254445 167 1.79661 3.0003387 Spiretrovirus nemertoderma9428 3117326 Viruses Viruses 48.9 8.95e-5   NR DBA49513.1 3117326 g237136 i0 51.2 0.736526946107784 41 20 73.7 0 5 127 1519 1559 DBA49513.1 MAG TPA_asm: Gag-Pol [Spiretrovirus nemertoderma9428] diamond 123 48.9 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales     Spiretrovirus nemertoderma9428
28074831 28074831 PRJEB10140_P_NODE_198545_length_196_cov_2.040816_g181236_i0 PRJEB10140 198545 196 2.040816 3.99999936 Spiretrovirus marine7 3117324 Viruses Viruses 97.1 1.47e-21   NR DBA46637.1 3117324 g181236 i0 70.3 2.93877551020408 64 19 98 0 194 3 629 692 DBA46637.1 MAG TPA_asm: Gag-Pol [Spiretrovirus marine7064] diamond 576 97.1 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales     Spiretrovirus marine7064
29779872 29779872 PRJEB10140_P_NODE_145411_length_254_cov_1.800000_g128103_i0 PRJEB10140 145411 254 1.8 4.572 Spiretrovirus marine7 3117324 Viruses Viruses 78.6 1.07e-14   NR DBA46637.1 3117324 g128103 i0 53.7 0.791338582677165 67 30 79.1 1 2 202 978 1043 DBA46637.1 MAG TPA_asm: Gag-Pol [Spiretrovirus marine7064] diamond 201 78.6 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales     Spiretrovirus marine7064
30285758 30285758 PRJEB10140_P_NODE_178432_length_214_cov_1.272727_g161123_i0 PRJEB10140 178432 214 1.272727 2.72363578 Spiretrovirus marine7 3117324 Viruses Viruses 102 2.5499999999999998e-23   NR DBA46637.1 3117324 g161123 i0 71 2.92990654205607 69 20 96.7 0 208 2 919 987 DBA46637.1 MAG TPA_asm: Gag-Pol [Spiretrovirus marine7064] diamond 627 102 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales     Spiretrovirus marine7064

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;