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contig_metadata

16 rows where bioproject = "PRJEB10140" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 16 ✖

bioproject 1

  • PRJEB10140 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1286010 1286010 PRJEB10140_P_NODE_153842_length_242_cov_1.331606_g136534_i0 PRJEB10140 153842 242 1.331606 3.22248652 Skokie tombus-like virus 2789423 Viruses Viruses 405 1.45e-108   NTclustered gi|1933757591|gb|MW177750.1| 2789423 g136534 i0 96.721 2.01652892561983 244 6 100 1 1 242 296 53 Skokie tombus-like virus strain USAdp hypothetical protein 2 gene, partial cds blastn 488 405 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Skokie tombus-like virus
6391391 6391391 PRJEB10140_P_NODE_56426_length_650_cov_5.490849_g40005_i0 PRJEB10140 56426 650 5.490849 35.6905185 Betacoronavirus pandemicum 3418604 Viruses Viruses 54.7 0.018   NTclustered gi|2560523083|emb|OY698888.1| 2697049 g40005 i0 100 0.0446153846153846 29 0 4 0 558 586 12031 12003 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 29 54.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
10216144 10216144 PRJEB10140_P_NODE_80249_length_457_cov_2.232843_g63000_i0 PRJEB10140 80249 457 2.232843 10.20409251 Betacoronavirus pandemicum 3418604 Viruses Viruses 54.7 0.012   NTclustered gi|2560523083|emb|OY698888.1| 2697049 g63000 i0 100 0.0634573304157549 29 0 6 0 216 244 12003 12031 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 29 54.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12766729 12766729 PRJEB10140_P_NODE_41791_length_858_cov_8.461063_g27258_i0 PRJEB10140 41791 858 8.461063 72.59592054 Betacoronavirus pandemicum 3418604 Viruses Viruses 54.7 0.024   NTclustered gi|2560523083|emb|OY698888.1| 2697049 g27258 i0 100 0.0337995337995338 29 0 3 0 450 478 12031 12003 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 29 54.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
22659131 22659131 PRJEB10140_P_NODE_183858_length_209_cov_0.975000_g166549_i0 PRJEB10140 183858 209 0.975 2.03775 Viruses 10239 Viruses Viruses 215 2.21e-51   NTclustered gi|2214127666|tpg|BK059611.1| 2904742 g166549 i0 85.167 2 209 31 100 0 1 209 8412 8204 TPA_asm: Leptasterias associated picornavirus 2, complete genome blastn 418 215 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Leptasterias associated picornavirus 2
26747352 26747352 PRJEB10140_P_NODE_286701_length_162_cov_2.300885_g269392_i0 PRJEB10140 286701 162 2.300885 3.7274337 Marine RNA virus BC-3 2315693 Viruses Viruses 56.6 1.62e-7   NR YP_009666861.1 2315693 g269392 i0 74.3 1.88888888888889 35 7 61.1 1 37 135 791 825 YP_009666861.1 structural polyprotein [Marine RNA virus BC-3] diamond 306 56.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae Sogarnavirus Sogarnavirus kitsilanoensis
27158704 27158704 PRJEB10140_P_NODE_188682_length_204_cov_2.258065_g171373_i0 PRJEB10140 188682 204 2.258065 4.6064526 Mute swan feces associated picorna-like virus 13 2832186 Viruses Viruses 94.7 1.08e-20   NR QUS52710.1 2832186 g171373 i0 56.1 0.970588235294118 66 29 97.1 0 3 200 745 810 QUS52710.1 hypothetical protein 2 [Mute swan feces associated picorna-like virus 13] diamond 198 94.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Mute swan feces associated picorna-like virus 13
28485436 28485436 PRJEB10140_P_NODE_218567_length_183_cov_2.283582_g201258_i0 PRJEB10140 218567 183 2.283582 4.17895506 Leptasterias associated picornavirus 2 2904742 Viruses Viruses 105 1.0099999999999999e-24   NR DAZ87500.1 2904742 g201258 i0 70.5 1 61 18 100 0 183 1 1199 1259 DAZ87500.1 TPA_asm: non-structural polyprotein [Leptasterias associated picornavirus 2] diamond 183 105 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Leptasterias associated picornavirus 2
28959213 28959213 PRJEB10140_P_NODE_211968_length_187_cov_1.992754_g194659_i0 PRJEB10140 211968 187 1.992754 3.72644998 Orbilia oligospora narnavirus 1 3380797 Viruses Viruses 55.5 5.85e-7   NR BFU49212.1 3380797 g194659 i0 44.4 2.63101604278075 54 30 86.6 0 2 163 219 272 BFU49212.1 RNA-dependent RNA polymerase [Orbilia oligospora narnavirus 1] diamond 492 55.5 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Orbilia oligospora narnavirus 1
29874764 29874764 PRJEB10140_P_NODE_224431_length_180_cov_1.496183_g207122_i0 PRJEB10140 224431 180 1.496183 2.6931294 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 44.7 0.00335   NR UNY41971.1 3003959 g207122 i0 43.9 1.68333333333333 41 23 68.3 0 3 125 267 307 UNY41971.1 MAG: polyprotein 2 [Picornavirales sp.] diamond 303 44.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
30759327 30759327 PRJEB10140_P_NODE_127974_length_286_cov_3.565401_g110667_i0 PRJEB10140 127974 286 3.565401 10.19704686 Barns Ness breadcrumb sponge aquatic picorna-like virus 4 2021880 Viruses Viruses 151 2.8699999999999993e-40   NR ASM94058.1 2021880 g110667 i0 77.4 1.95104895104895 93 21 97.6 0 3 281 265 357 ASM94058.1 hypothetical protein, partial [Barns Ness breadcrumb sponge aquatic picorna-like virus 4] diamond 558 151 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Barns Ness breadcrumb sponge aquatic picorna-like virus 4
30917543 30917543 PRJEB10140_P_NODE_81814_length_448_cov_1.533835_g64555_i0 PRJEB10140 81814 448 1.533835 6.8715808 Marine RNA virus BC-3 2315693 Viruses Viruses 199 8.54e-56   NR YP_009666860.1 2315693 g64555 i0 59.5 2.96651785714286 148 60 99.1 0 446 3 559 706 YP_009666860.1 non-structural polyprotein [Marine RNA virus BC-3] diamond 1329 199 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae Sogarnavirus Sogarnavirus kitsilanoensis
31075385 31075385 PRJEB10140_P_NODE_242895_length_170_cov_1.239669_g225586_i0 PRJEB10140 242895 170 1.239669 2.1074373 Marine RNA virus BC-2 2315692 Viruses Viruses 65.5 1.33e-10   NR YP_009666859.1 2315692 g225586 i0 87.5 0.564705882352941 32 4 56.5 0 154 59 826 857 YP_009666859.1 structural polyprotein, partial [Marine RNA virus BC-2] diamond 96 65.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae Sogarnavirus Sogarnavirus gustavseniae
31391529 31391529 PRJEB10140_P_NODE_156696_length_238_cov_1.772487_g139388_i0 PRJEB10140 156696 238 1.772487 4.21851906 Marine RNA virus BC-2 2315692 Viruses Viruses 139 2.76e-36   NR YP_009666859.1 2315692 g139388 i0 87.3 0.995798319327731 79 10 99.6 0 238 2 339 417 YP_009666859.1 structural polyprotein, partial [Marine RNA virus BC-2] diamond 237 139 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae Sogarnavirus Sogarnavirus gustavseniae
31960702 31960702 PRJEB10140_P_NODE_146598_length_252_cov_2.458128_g129290_i0 PRJEB10140 146598 252 2.458128 6.19448256 Marine RNA virus BC-2 2315692 Viruses Viruses 163 1.1999999999999998e-44   NR YP_009666859.1 2315692 g129290 i0 88.9 0.964285714285714 81 9 96.4 0 245 3 425 505 YP_009666859.1 structural polyprotein, partial [Marine RNA virus BC-2] diamond 243 163 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae Sogarnavirus Sogarnavirus gustavseniae
32372322 32372322 PRJEB10140_P_NODE_256679_length_167_cov_0.881356_g239370_i0 PRJEB10140 256679 167 0.881356 1.47186452 Marine RNA virus PAL156 1804154 Viruses Viruses 65.5 1.27e-10   NR YP_009230120.1 1804154 g239370 i0 53.8 1.90419161676647 52 24 93.4 0 160 5 920 971 YP_009230120.1 polyprotein [Marine RNA virus PAL156] diamond 318 65.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae Sogarnavirus Sogarnavirus palmerensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;