RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB10140", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB10140 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1287457 1287457 PRJEB10140_P_NODE_51182_length_713_cov_7.469880_g35301_i0 PRJEB10140 51182 713 7.46988 53.2602444 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 356 9.06e-122   NR PJF17825.1 1246581 g35301 i0 72.8 9.55539971949509 228 62 95.9 0 3 686 27 254 PJF17825.1 hypothetical protein PSACC_02363 [Paramicrosporidium saccamoebae] diamond 6813 356 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
29527363 29527363 PRJEB10140_P_NODE_160970_length_233_cov_1.119565_g143662_i0 PRJEB10140 160970 233 1.119565 2.60858645 Rozella allomycis CSF55 988480 Fungi Fungi 88.6 1.61e-18   NR EPZ31152.1 988480 g143662 i0 78.7 1.21030042918455 47 10 60.5 0 3 143 365 411 EPZ31152.1 Methionine aminopeptidase 2B [Rozella allomycis CSF55] diamond 282 88.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;