RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJEB10140", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 9 ✖

tax_kingdom 1

  • Fungi · 9 ✖

tax_clade 1

bioproject 1

  • PRJEB10140 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26741278 26741278 PRJEB10140_P_NODE_120601_length_303_cov_2.464567_g103294_i0 PRJEB10140 120601 303 2.464567 7.46763801 Allomyces 28581 Fungi Fungi 105 4.33e-24   NR KAJ3365628.1 64505 g103294 i0 62.7 3.28712871287129 83 30 81.2 1 302 57 26 108 KAJ3365628.1 hypothetical protein GGF32_008761 [Allomyces javanicus] diamond 996 105 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces javanicus
27222103 27222103 PRJEB10140_P_NODE_53123_length_689_cov_1.628125_g37027_i0 PRJEB10140 53123 689 1.628125 11.21778125 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 105 8.47e-22   NR KNE58610.1 578462 g37027 i0 36.1 3.17851959361393 158 92 67.5 3 660 196 239 390 KNE58610.1 hypothetical protein AMAG_04174 [Allomyces macrogynus ATCC 38327] diamond 2190 105 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
27632978 27632978 PRJEB10140_P_NODE_190764_length_203_cov_0.928571_g173455_i0 PRJEB10140 190764 203 0.928571 1.88499913 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 47.8 1.2e-4   NR KNE63803.1 578462 g173455 i0 48.9 3.36945812807882 45 23 66.5 0 201 67 90 134 KNE63803.1 hypothetical protein AMAG_08875 [Allomyces macrogynus ATCC 38327] diamond 684 47.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
27722077 27722077 PRJEB10140_P_NODE_95844_length_382_cov_1.780781_g78550_i0 PRJEB10140 95844 382 1.780781 6.80258342 Eukaryota 2759 Fungi Fungi 55.1 4.11e-6   NR KNE66810.1 578462 g78550 i0 69.2 1.13089005235602 39 12 30.6 0 119 3 49 87 KNE66810.1 hypothetical protein AMAG_19523 [Allomyces macrogynus ATCC 38327] diamond 432 55.5 0.992792792792793 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
28422482 28422482 PRJEB10140_P_NODE_279826_length_163_cov_1.771930_g262517_i0 PRJEB10140 279826 163 1.77193 2.8882459 Paraphysoderma sedebokerense 1500003 Fungi Fungi 52 6.92e-6   NR KAI9136180.1 1500003 g262517 i0 52.2 1.69325153374233 46 21 84.7 1 1 138 633 677 KAI9136180.1 hypothetical protein BKA69DRAFT_1105695 [Paraphysoderma sedebokerense] diamond 276 52 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
29174150 29174150 PRJEB10140_P_NODE_133329_length_275_cov_3.238938_g116022_i0 PRJEB10140 133329 275 3.238938 8.9070795 Fungi 4751 Fungi Fungi 107 4.1e-26   NR KAI9222377.1 64508 g116022 i0 54.9 2.69454545454545 91 41 99.3 0 273 1 15 105 KAI9222377.1 PITH domain-containing protein [Blastocladiella britannica] diamond 741 107 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
31417039 31417039 PRJEB10140_P_NODE_242916_length_170_cov_1.239669_g225607_i0 PRJEB10140 242916 170 1.239669 2.1074373 root 1 Root_unresolved Root_unresolved 55.5 4.47e-7   NR KAI9176060.1 1313167 g225607 i0 55.4 5.77058823529412 56 24 97.1 1 4 168 271 326 KAI9176060.1 hypothetical protein H9P43_006425 [Blastocladiella emersonii ATCC 22665] diamond 981 55.8 0.99462365591397806 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
31480624 31480624 PRJEB10140_P_NODE_72636_length_505_cov_4.432018_g55483_i0 PRJEB10140 72636 505 4.432018 22.3816909 Allomyces 28581 Fungi Fungi 50.4 0.00103   NR KAJ3373297.1 64504 g55483 i0 69 0.855445544554455 29 9 17.2 0 5 91 613 641 KAJ3373297.1 hypothetical protein GGF31_000730 [Allomyces arbusculus] diamond 432 50.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
31897459 31897459 PRJEB10140_P_NODE_135997_length_270_cov_2.461538_g118690_i0 PRJEB10140 135997 270 2.461538 6.6461526 Coelomomyces lativittatus 945690 Fungi Fungi 90.5 1.74e-20   NR KAJ1510549.1 945690 g118690 i0 57.9 1.68888888888889 76 32 84.4 0 228 1 1 76 KAJ1510549.1 60S ribosomal protein L34 [Coelomomyces lativittatus] diamond 456 90.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;