RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB10140", tax_clade = "Sar" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB10140 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27032608 27032608 PRJEB10140_P_NODE_84362_length_434_cov_2.657143_g67092_i0 PRJEB10140 84362 434 2.657143 11.53200062 Paramarteilia canceri 2844372 SAR_Eukaryotes SAR_Eukaryotes 49.7 5.14e-4   NR MES1906484.1 2844372 g67092 i0 30.6 0.836405529953917 121 73 81.6 4 432 79 9 121 MES1906484.1 U2 small nuclear ribonucleoprotein A' [Paramarteilia canceri] diamond 363 49.7 1 Eukaryota Sar   Endomyxa Ascetosporea Paramyxida Marteiliidae Paramarteilia Paramarteilia canceri
27627082 27627082 PRJEB10140_P_NODE_77284_length_475_cov_1.178404_g60066_i0 PRJEB10140 77284 475 1.178404 5.597419 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 74.7 2.94e-12   NR MES1919248.1 126728 g60066 i0 33.1 1.75578947368421 139 84 82.7 3 10 402 325 462 MES1919248.1 nuclear localization sequence binding protein [Bonamia ostreae] diamond 834 74.7 1 Eukaryota Sar   Endomyxa Ascetosporea Haplosporida   Bonamia Bonamia ostreae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;