RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB10140", tax_clade = "Pithoviruses" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_clade 1

  • Pithoviruses · 3 ✖

bioproject 1

  • PRJEB10140 · 3 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27569682 27569682 PRJEB10140_P_NODE_187584_length_205_cov_2.217949_g170275_i0 PRJEB10140 187584 205 2.217949 4.54679545 Cedratvirus Zaza IHUMI 2126979 Viruses Viruses 88.6 4.65e-19   NR SPN79428.1 2126979 g170275 i0 53.7 0.980487804878049 67 31 98 0 201 1 215 281 SPN79428.1 Hypothetical protein ZAZAV_314 [Cedratvirus Zaza IHUMI] diamond 201 88.6 1 Viruses Pithoviruses             Cedratvirus Zaza IHUMI
29489590 29489590 PRJEB10140_P_NODE_177850_length_215_cov_0.867470_g160541_i0 PRJEB10140 177850 215 0.86747 1.8650605 Viruses 10239 Viruses Viruses 62 3.39e-9   NR YP_009001027.1 1450746 g160541 i0 42.3 2.97209302325581 71 41 99.1 0 1 213 39 109 YP_009001027.1 hypothetical protein pv_125 [Pithovirus sibericum] diamond 639 62.4 0.993589743589744 Viruses Pithoviruses           Alphapithovirus Alphapithovirus sibericum
32782169 32782169 PRJEB10140_P_NODE_128260_length_286_cov_1.502110_g110953_i0 PRJEB10140 128260 286 1.50211 4.2960346 Pithovirus LCPAC4 2506596 Viruses Viruses 62.8 4.44e-9   NR QBK92880.1 2506596 g110953 i0 47.8 1.78321678321678 69 34 70.3 1 2 202 138 206 QBK92880.1 MAG: uncharacterized protein LCPAC403_00140 [Pithovirus LCPAC403] diamond 510 62.8 1 Viruses Pithoviruses             Pithovirus LCPAC403

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;