RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJEB10140", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJEB10140 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28106410 28106410 PRJEB10140_P_NODE_28125_length_1191_cov_13.230298_g16974_i0 PRJEB10140 28125 1191 13.230298 157.57284918 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 58.2 5.84e-5   NR MBU3742179.1 2447898 g16974 i0 36.3 0.201511335012594 80 47 19.6 2 837 1070 961 1038 MBU3742179.1 PKD domain-containing protein [Candidatus Kapaibacterium sp.] diamond 240 58.2 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30158673 30158673 PRJEB10140_P_NODE_123852_length_295_cov_8.004065_g106545_i0 PRJEB10140 123852 295 8.004065 23.61199175 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 41.6 0.0246   NR HLP47093.1 2447898 g106545 i0 38.5 0.396610169491525 39 24 39.7 0 267 151 10 48 HLP47093.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 117 41.6 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31391690 31391690 PRJEB10140_P_NODE_93016_length_394_cov_1.017391_g75723_i0 PRJEB10140 93016 394 1.017391 4.00852054 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 129 1.01e-31   NR TAE30512.1 2447898 g75723 i0 53.9 3.95177664974619 128 57 97.5 1 3 386 175 300 TAE30512.1 MAG: T9SS C-terminal target domain-containing protein [Candidatus Kapaibacterium sp.] diamond 1557 129 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;