RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB10140", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJEB10140 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27089916 27089916 PRJEB10140_P_NODE_38502_length_922_cov_1.727377_g24667_i0 PRJEB10140 38502 922 1.727377 15.92641594 Pseudomonadati 3379134 Bacteria Bacteria 472 4.8299999999999985e-160   NR WP_114985036.1 1457365 g24667 i0 67.8 13.9587852494577 307 99 99.9 0 1 921 260 566 WP_114985036.1 glycoside hydrolase family 65 protein [Cyclonatronum proteinivorum] diamond 12870 472 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Cyclonatronaceae Cyclonatronum Cyclonatronum proteinivorum
28732000 28732000 PRJEB10140_P_NODE_170807_length_222_cov_1.167630_g153498_i0 PRJEB10140 170807 222 1.16763 2.5921386 FCB group 1783270 Bacteria Bacteria 128 2.34e-32   NR WP_142453821.1 1302730 g153498 i0 79.2 12.6621621621622 72 15 97.3 0 220 5 356 427 WP_142453821.1 formate C-acetyltransferase [Gracilimonas mengyeensis] diamond 2811 128 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Gracilimonas Gracilimonas mengyeensis
32245905 32245905 PRJEB10140_P_NODE_249578_length_168_cov_1.310924_g232269_i0 PRJEB10140 249578 168 1.310924 2.20235232 Balneola sp. 2024824 Bacteria Bacteria 42.4 0.0185   NR MFV1885495.1 2024824 g232269 i0 47.1 0.607142857142857 34 18 60.7 0 53 154 36 69 MFV1885495.1 SIR2 family protein [Balneola sp.] diamond 102 42.4 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.
32618955 32618955 PRJEB10140_P_NODE_245940_length_169_cov_0.866667_g228631_i0 PRJEB10140 245940 169 0.866667 1.46466723 Pseudomonadati 3379134 Bacteria Bacteria 85.5 1.06e-17   NR WP_103664997.1 1749045 g228631 i0 70.9 1.88165680473373 55 16 97.6 0 165 1 173 227 WP_103664997.1 hypothetical protein [Gracilimonas amylolytica] diamond 318 86.3 0.990730011587486 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Gracilimonas Gracilimonas amylolytica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;