RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB10140", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJEB10140 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29527507 29527507 PRJEB10140_P_NODE_87930_length_416_cov_2.942779_g70648_i0 PRJEB10140 87930 416 2.942779 12.24196064 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 47.4 0.00513   NR NIM11500.1 2052149 g70648 i0 25.6 0.901442307692308 125 84 89.4 3 414 43 29 145 NIM11500.1 6-bladed beta-propeller [Candidatus Aminicenantes bacterium] diamond 375 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
31707768 31707768 PRJEB10140_P_NODE_7097_length_2664_cov_6.746463_g3940_i0 PRJEB10140 7097 2664 6.746463 179.72577432 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 51.6 0.0048   NR MCJ7681702.1 2052149 g3940 i0 25.5 0.172297297297297 153 85 15.3 6 1464 1871 36 176 MCJ7681702.1 6-bladed beta-propeller [Candidatus Aminicenantes bacterium] diamond 459 51.6 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
31733161 31733161 PRJEB10140_P_NODE_112217_length_325_cov_2.503623_g94911_i0 PRJEB10140 112217 325 2.503623 8.13677475 Pseudomonadati 3379134 Bacteria Bacteria 46.2 0.00515   NR MCK4763001.1 2052149 g94911 i0 31.3 1.51384615384615 83 52 75.7 2 281 36 34 112 MCK4763001.1 6-bladed beta-propeller [Candidatus Aminicenantes bacterium] diamond 492 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;